Detail



ID : Ahg945197

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|945197|scaffold_701426.1
Sequence
TTTTTGGGGG TTGTGAGTGA TATGAAGAAG CGGGAAAATT TGGGATTAGG GTTCGAGTGG CAGGTTATCT TCTGGTTATC GATTTGGTTG GCGATTTCGC AACAAGCGCT GGGATTGAGA CCCATAAGGG AGAAAACTCG ATCATGGAGT GACGAGTGGC TCTTTGGTAG GAAACAAGAA GCTGAAGTAG GACCGTTTTC TGCATGGAAT ATAACAGGAA CGTATAGAGG AACTTGGAAG TTTCTGAATT CCGTCAATAG CTCTTCGAAG TTTCAAGACT TTCAAAAAGA AAATGGTAAT TCTGTGGTTG AGTTAGTGGC AGTTCCTACA AAGATAACCG GTGTGCATTA TGTTCAGGGT GTAGTTGTTT TCCATGACGT ATTTGACAAT GAACAAAATG TGGGTGGTGC CCAAATAAAT CTGGAAGGTG TATATATATG GCCCTTTAGA CAACTCCGCC TTGTGGCTAA CAGCGGCAAG GAGAGTGATT CAGGGCAAGA AGACAATAAT CTTCTCTCAA ATCCCTATCA TCTGCTTGGA ATTTTCTCCT CTCAAGTGTT TCAAGAATCT CCAAGAGACA GATTACTGAA ACGGAAACTT TCTCCAGTAA ATGAAATGGA GAAGCACTGT AACATCGAAA TAGCAGCTCA AGTATCCCGC GTGGCTTCTG GTGAAAATAA TGGAGACAAA AATTATTATC ACATGGAAGG ATTGATGGAA AGTCCTGGGG TAGGCGATGA CGGAGATTGT TTTTCCCCTT TGTTACTGAA TGCAACTTCT GTAAATGTCG AAGTCTACTA TAACAAAGCT GTGAACTATA CACTGATGGT CACTTTTATC TCTTTCCTCC AGGTTCTTTT GTTGATCCGG CAAATGGAGC ACGGTAACAC ACAATCTGGT GCTGCTAAGG TATCCATTGT AATGATTGGG CAACAAGCGA TCATGGATGC TTATTTGTGC CTCTTACATC TCACAGCCGG TATATTAGTC GAATCTCTGT TTAATGCATT TGCAACCGCT GCGTTCTTCA AATTCGTAGT CTTCTCGATT TTTGAGATGA GATATCTTCT GGCTATATGG AAAGCAACCC GTCCTTCCAA TAGCGGAGAG GGTTGGGAAA CAATGAGGCG AGAACTGTCC TTTCTGTACA GCCGTTTCTA TGGGATCCTT CTTGGAGGCA TTTTGATAAT GTACCAGTTC CACAACTACA TGCAGCCGAT TCTCCTTCTC ATGTACTCAT TTTGGATACC ACAAATAGTT GCCAATGTCG TCCGGGATTC AAGAAAGCCT CTGCATCTGT ATTATATCTT GGGCATGACA GCGACACGGT TAGCTATACC GTTATATGTT TTTGGATGCC CACACAACTT CATGCGTGTA GAGCCCAACA AGGTCTGGTG TATATGCTTG TGCACATCCA TGGGGTCGCA AGCTGTCATT CTTCTTCTTC AGCATTATTT TGGTTCACGC TGCTTTGTTC CCCGTCAGAT GCTACCAGAG AAATACAACT ACCACCGAAG ATTTAATCGG GACGTAAGCC GCAACACTGA TTGCGTTATC TGCATGACTG CTATTGATCT CAGACAGCAT ACCAGTGATT TCATGATAAC TCCATGTGAG CATTTCTTTC ACTCGGGATG CTTACAGAGA TGGATGGATA TAAAAATGGA GTGTCCAACT TGTCGGCGTT CTCTTCCTCC AGCATAGAGG ATGTTTTCAA TTTGTTA 
Length1727
Protein Sequence
Protein Residue
Map Locationscaffold_7: 5422542.. 5426606
Download Sequence
A.thaliana
AGI-codeAT4G28370.1
DescriptionRING/U-box superfamily protein
TAIR curator summary
Alias[FLY1][FLYING SAUCER 1]
Gene coexpression
MR
MR Locus Description
16.0624 Ahg495205 Tetratricopeptide repeat (TPR)-like superfamily protein
16.5529 Ahg940499 leucine-rich repeat transmembrane protein kinase family protein
17.7482 Ahg919313 Basic-leucine zipper (bZIP) transcription factor family protein
20.4939 Ahg471548 ELM2 domain-containing protein
25.2587 Ahg916244 nuclear pore anchor
26.8328 Ahg482052 autophagy 9 (APG9)
35.8887 Ahg928542 DNAJ heat shock family protein
48.2079 Ahg474191 scarecrow-like 5
59.7495 Ahg334149 Transcription factor jumonji (jmj) family protein / zinc finger (C5HC2 type) family protein
61.1146 Ahg890818 SNARE associated Golgi protein family
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression