Detail



ID : Ahg945288

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|945288|scaffold_701517.1
Sequence
AGAGCAAAAA CTCTAATTCC ATGGCCTTCT CGCTCCTCTC TCCAATTCCT TCCTCTGCCT CTCTTTCTTT CACTCTCTCC GCCATTAATA ATGCCTCCTC CTCTCTCTCC CCTCTCTACT CTTTATATCA TCCCAAAGGA ACCTTACGAA CCAGAACCGC GACCTCGATT TTCGGAGCCT CTGGGAACTT GAGGATTGAT TCCATGACGG ATAATTATAA TAGGCAATTG GTTTGTAGGA TTGGTGGTTG CGGCGGCGGT GGTGAATTGG ATGATATGGA TGAATGTGAA ATCCAGAGAA TTGGAAATCA CGACGAAGAT GACGACGAAT TCATACAAGT CCATGCATCC TCTGCTGCTT CTCCTGAGAG ATGGGATGTT TTGGGTCTTG GCCAAGCCAT GGTAGATTTC TCTGGAGTTG TGGATGATGA GTTTCTAGAG AAACTGGGAT TAGAAAAGGG AACAAGGAAA CTGATTAATC ACGAGGAGAG GGGTAAATTA TTACAAGCAA TGGATGGTTG TAGCTATAAG GCGGCAGCTG GAGGATCATT GTCAAACACT TTAGTTGCTC TTGCAAGATT AGGTTCTCAA TCCATCGGTG ACCGGCCTTT GAATGTGGCA ATGGCTGGCA GTATTGGAGG TGACCCTCTC GGTAGCTTTT ACGGGACTAA ACTACGTCGA GCAAATGTAA ATTTTCTTTC TGCTCCAATC AAGGATGGAA CAACGGGAAC AGTGATAGTT CTCACAACTC CTGATGCCCA ACGAACTATG CTTGCATATC AGGGAACATC TTCTGTCGTT AATTATGATT CTTGTTTGGC TAGCTTGATA GCCAAGACAA ATGTCTTTGT TGTGGAAGGC TATTTGTTTG AGCTTCCTGA TACTATAAGG ACCATAACAA AAGCCTGCGA AGAAGCCCAC AGAAATGGGG CACTTGTTGC TGTGACAGCA TCAGATGTAT CCTGCATAGA GAGGCATTAT GATGATTTCT GGGACATTGT GGGGAACTAT GCAGATATTG TATTTGCAAA CAGCGATGAA GCAAGAGCGT TTTGTCACTT TTCCGCTGAG GAAAGCCCAA TTTCAGCGAC AAGGTACATG AGCCACTTTG TTCCATTTGT ATCGGTGACT GATGGAATCA ACGGGTCATA CATTGGAGTA AAAGGAGAGG CCATATACAT TCCTCCGTCC CCATGCGTGC CAGTTGATAC ATGTGGTGCT GGAGATGCAT ATGCTTCAGG GATCTTATAC GGTATCTTGA GAGGTGTCTC TGACTTGAAA GGAATGGGAG ATATGGCTGC AACGATTGCA GCAACAGTGG TGGGTCAACA AGGAACCAGG CTTAGGGTTC AGGACGCTGT TGAGCTTGCT CGATCACATG CTTTCCGTCT CAACGGATCT GGTGTTCGAA CAGATGTTGG GTCTTGATGA AATCTCTAGC TTGTGAT 
Length1447
Protein Sequence
Protein Residue
Map Locationscaffold_7: 5722830.. 5725149
Download Sequence
A.thaliana
AGI-codeAT4G27600.1
DescriptionpfkB-like carbohydrate kinase family protein
TAIR curator summaryEncodes a phosphofructokinase B-type carbohydrate kinase family protein, NARA5. Regulates photosynthetic gene expression.
Alias[NARA5][GENES NECESSARY FOR THE ACHIEVEMENT OF RUBISCO ACCUMULATION 5]
Gene coexpression
MR
MR Locus Description
5.09902 Ahg939504
8.48528 Ahg476635 fatty acid biosynthesis 1
14.5602 Ahg479727 Tetratricopeptide repeat (TPR)-like superfamily protein
22.9129 Ahg942753 RH39
26.2298 Ahg490589 Transmembrane amino acid transporter family protein
26.533 Ahg477305 DEAD/DEAH box helicase, putative
26.7208 Ahg929130 beta galactosidase 1
26.7582 Ahg929719 CRS1 / YhbY (CRM) domain-containing protein
28.5657 Ahg942264 Threonyl-tRNA synthetase
32.187 Ahg934049 Protein of unknown function, DUF642
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression