Detail



ID : Ahg477305

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|477305|fgenesh2_kg.3__6__AT3G02060.1
Sequence
AAACCTCTGG GGTTCTTGTT AAAGATGACA TCTTTGCTTC CAAATCCCGA CCCGATTACT ATACCCCTCG TCTTCAAGCT TTGCTCCTTT CCTCCGCCAC GGAGGCTCTT CTCTCTTAGG CTCAGGCGCT TCACCCGAAA GTCATCATCT CTTCTTCCGT TTGTCGCTGT TTCCTCTCTC TCCGCTACTG CCCCAAAACC TGCCAGATGG AGAGAGAAGC CGGAATTAGC GGAAAGCGAC TCAATTTCCC TCCTCAACGA GAGGATTCGG CGTGACATCG GCAAGAGAGA GACTGCTAGG CCGGCCATGG ACTCTGAGGA GACCGAGAAG TACATTCAGA TGGTCAAGGA ACAACAAGAG AGGGGTCTGC AGAAGCTCAA AGGAATCAGG CAAGGTACAG AGGCTGCTGG TACCGGTGGT TTTAGCTATA AGGTGGACCC TTACAGTCTC CTTTCCGGTG ATTATGTGGT GCACAAGAAA GTAGGCATTG GGCGTTTTGT TGGGATAAAG TTTGATGTCC CCAAGGATTC TTCAGAGCCC CTCGAATATG TCTTTATAGA GTATGCTGAT GGCATGGCCA AGCTTCCCCT CAAACAGGCC TCGCGTTTGC TCTACCGATA CAATCTACCA AATGAGACCA AACGGCCTCG GACTTTGAGT CGGCTGAGTG ACACTAGTGT TTGGGAAAGA AGAAAGACCA AAGGAAAAGT AGCAATTCAG AAAATGGTCG TTGACTTGAT GGAGCTATAT CTTCATAGGC TTAGACAGAA GAGATATCCC TATCCAAAAA ATCCCATCAT GGCTGATTTT GCGGCTCAAT TTCCTTATAA CGCTACACCT GACCAGAAGC AGGCTTTCCT GGATGTTGAG AAGGATTTGA CAGAGAGAGA AACTCCTATG GACCGATTGA TCTGTGGAGA TGTTGGGTTT GGTAAAACAG AGGTTGCTTT ACGAGCCATC TTTTGTGTAG TCTCAGCTGG AAAACAAGCT ATGGTTTTAG CACCGACAAT TGTATTGGCG AAGCAACATT ACGATGTTAT CTCAGAGCGG TTTTCCTTGT ATCCACAAAT CAAAGTGGGC CTTTTAAGTC GGTTTCAGAC CAAAGCAGAA AAGGAGGAGT ATTTGGAAAT GATAAAAGAT GGACATCTGA ATATCATTGT GGGTACTCAC TCACTTCTCG GGAGCCGTGT TGTGTACAGT AATTTAGGCC TCCTTGTGGT TGATGAGGAA CAGAGATTTG GGGTCAAGCA GAAAGAAAAG ATAGCATCTT TCAAAACATC AGTGGATGTG CTTACATTAT CCGCAACACC CATACCAAGG ACACTGTACT TAGCTTTGAC TGGATTCCGG GATGCCAGTT TAATCTCCAC ACCGCCTCCG GAGAGGATTC CAATAAAAAC CCATCTTTCG TCATTCCGTA AGGAAAAGGT GATAGAAGCA ATAAAAAATG AGCTGGATCG TGGTGGCCAA GTTTTCTATG TCTTGCCTCG GATTAAAGGA CTAGAAGAAG TGATGGATTT TCTAGAAGAA GCATTTCCAG ATATTGACAT CGCTATGGCA CATGGAAAGC AATACTCGAA ACAACTAGAG GAAACCATGG GGAGATTTGC GCAAGGAAAG ATCAAAATCC TCATATGTAC TAATATTGTT GAAAGCGGAC TTGATATTCA AAATGCAAAT ACCATAATCA TTCAGGATGT TCAACAATTT GGGCTCGCTC AGTTGTACCA GTTGCGTGGA AGGGTTGGTC GGGCAGATAA AGAAGCTCAT GCCTACCTAT TTTATCCCGA TAAATCGCTT CTCTCTGATC AAGCACTGGA AAGGCTTAGC GCTCTTGAAG AGTGCCGTGA ACTTGGACAA GGTTTCCAAC TTGCAGAGAG GGATATGGGT ATAAGAGGTT TTGGGACAAT CTTTGGAGAA CAACAGACGG GGGATGTTGG AAATGTCGGT ATCGATCTCT TCTTTGAAAT GCTTTTTGAG AGTCTGTCCA AGGTGGAGGA ACTCCGTATT TTTTCGGTTC CATATGACCT AGTGAAGATT GACATAAATA TAAATCCCCG GCTACCCTCG GAGTATGTAA ATTACCTGGA AAATCCGATG GAGATCATTA ATGAAGCTGA AAAAGCAGCG GAGAAAGATA TGTGGAGTCT AATGCAATTC ACAGAGAACC TGCGTCGCCA ATATGGGAAA GAGCCTTACT CCATGGAGAT CATTTTAAAG AAGCTGTATG TGAGACGCAT GGCGGCTGAT CTTGGAGTAA ACAGAATTTA TGCATCAGGC AAGATGGTTG TCATGAAAAC AAATATGAGT AAGAAGGTGT TCAAGCTGAT CACAGATTCC ATGACTTGTG ACGTTTACCG AAGCTCCTTG ATATACGAAG GAGATCAAAT AATGGCGGAA CTTCTGCTGG AGCTACCAAG AGAACAGTTA CTGAACTGGA TGTTCCAGTG CTTGTCAGAA CTTCATGCAT CACTTCCTGC CCTTATCAAA TATTAGTTCC CCCTTCTCAG TTTCTCTTGC TTGTAGGATG TGTTAAAAGA AGAGAGACTC CTCAGCACTT GTGTTGCTGT GAAGTTTTCT TCATAGAATA GAACAGAAGA GAGGAGAATA ATATTTGCCT AAATATCTAC AAGGGCAGCA TTTTAATCAG CAGCTACACA CACTTTTCAC GTTGAGATCA TCGACCATTG GGAAAGTTTT GGAAATCCAT GTATATTGTG GGAATTAAAT AGTGGAACAT AATTGTTTAT GGCTCAGTAA AAAGCCCATT TAGATGTCCT 
Length2780
Protein Sequence
Protein Residue
Map Locationscaffold_3: 6555.. 10985
Download Sequence
A.thaliana
AGI-codeAT3G02060.1
DescriptionDEAD/DEAH box helicase, putative
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
7.34847 Ahg929841 sodium:hydrogen antiporter 1
10.4881 Ahg944415 Pentatricopeptide repeat (PPR) superfamily protein
12.8452 Ahg494796 Insulinase (Peptidase family M16) family protein
13.4164 Ahg474459 phosphoenolpyruvate carboxylase 1
14 Ahg470732 fructose-2,6-bisphosphatase
14.6969 Ahg482188 Lycopene beta/epsilon cyclase protein
15.4919 Ahg951457 Tetratricopeptide repeat (TPR)-like superfamily protein
16.7332 Ahg480837 Tetratricopeptide repeat (TPR)-like superfamily protein
17.0294 Ahg939058 eukaryotic translation initiation factor 4G
22.3159 Ahg931448 casein kinase I-like 5
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression