Detail



ID : Ahg946058

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|946058|scaffold_702287.1
Sequence
TGAAAGAGCT AAAATTGTAG ATGGCCTTTG ACTTACCAAA CGATTTCAGG TGCCCGATCT CTCTTGAGAT TATGTCTGAC CCGGTTATCC TCCAATCGGG TCATACTTTC GATCGGGTCT CTATCCAACA ATGGATTGAC TCCGGCAATC GAACTTGCCC AATCACCAAG CTCCCGCTAT CTGAAAACCC TTCTCTGATT CCCAATCACG CACTTCGTAG CTTAATTTCA AATTTTGCTC ATGTGAGTCC TAAGGAATCA ACACGTCCTC GAACTCAACA AGAACACTCT CACTCTCAAT CCCAAGCTTT AATCTCCACT CTCGTCTCTC GATCGCCGTC TAATGCGTCA AAGCTCGAGT CTTTGAGTCG ACTCGTTCGT CTCACGAAGC GAGACTCGTT AATCAGGAGG AAAGTTACTG AATCAGGAGC GGTTCGTGCG GCGTTGGATT GTGTTGACTC TGGTAATCAG GTTTTGCAGG AAAAGTCTCT GTCTTTGCTT TTGAATCTTA GTTTAGAAGA TGATAACAAA GTGGGTTTAG TAGCTGATGG AGTGATAAGA CGGATTGTTG CTGTTTTACG GGTCGGGTCA CCGGATTGTA AAGCGATTGC TGCTACTCTG TTAACGAGTT TAGCTGTTGT TGAAGTTAAT AAAGCCACTA TTGGATCGTA TCCTGATGCA ATCTCTGCTC TTGTTTATCT TCTCCGGGTA GGGAATGATA GGGAGAGAAA GGAATCAGCG ACGGCTCTTT ACGCGCTCTG CTCGTTTCCG GATAATCGAA AACGGGTTGT GGATTGTGGG TCGGTGCCTA TTTTGGTTGA AGCAGCTGAT TCAGGGCTAG AGAGAGCAGT GGAAGTGTTG GGACTTTTGG TTAAGTGTAG AGGAGGAAGA GAGGAAATGA GTAAAGTAAG TGGCTTTGTT GAGGTTTTGG TTAACGTTTT GAGGAATGGA AGTTTGAAAG GGATTCAGTA TTCTCTGTTT ATCCTCAATT GCTTGTGTTG TTGTAGCCGA GAAATCGTCG ATGAGGTTAA AAGAGAAGGT GTTGTAGAGA TATGCTTTGG TTTGGAGGAT AATGAGAGTG AGAAAATCAG AAGGAATGCT ACTATCTTAG TCCATACTTT ACTTGGGATT TCAATGAATT CATGATCTTG GGAGTGTGAT TTGGT 
Length1165
Protein Sequence
Protein Residue
Map Locationscaffold_7: 8744929.. 8746093
Download Sequence
A.thaliana
AGI-codeAT4G21350.1
Descriptionplant U-box 8
TAIR curator summaryEncodes a U-box/ARM repeat protein required fore self-incompatibility.
Alias[B80][PUB8][plant U-box 8]
Gene coexpression
MR
MR Locus Description
14.8324 Ahg480014 RPM1 interacting protein 4
28.6356 Ahg494346 disease resistance protein (TIR-NBS-LRR class) family
31.496 Ahg922633 SH3 domain-containing protein
36.8511 Ahg952033 Cyclase family protein
45 Ahg350428 Tetratricopeptide repeat (TPR)-like superfamily protein
52.5642 Ahg495950 with no lysine (K) kinase 4
57.7495 Ahg488726 Curculin-like (mannose-binding) lectin family protein
64.405 Ahg938307 Major facilitator superfamily protein
72.4293 Ahg479142 F-box and associated interaction domains-containing protein
75.5579 Ahg493556 ammonium transporter 1;1
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression