Detail



ID : Ahg922633

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|922633|scaffold_103914.1
Sequence
TTCGTTTCGT TTGGTTCAGT CATGGAAGCT ATTAGAAAGC AAGCGGCTAA GCTCAGAGAG CAAGTCGCGA GGCAACAGCA AGCGGTTTTG AAGCATTTAG GGCATGTTAA TGCTGATGCT GTTGTTGTTG ATGAAGAAGA GCTTCACTGT CATCAGAAAC TTCAAGATCT TTATAGCTCT ACTAAGGCTG CTAAGCGTTT GCAAAGGAAT ATTGTTCGTG GACTCGAAGG TTTCATTGCG ACAGGCACGA AGGTTGTAGA GATAGGGTTG AAGTTTGCTG AAGATTTTAA GAAATATGGA GATGAGAATC CTGATGCTAA TACTCCTCTC TCAAGAGTTG CTCATCACTT TGGGACCTCT TACAAGTCGG TGGAAGGCGA GAGGGAAACT CTCCTCGGAG TTCTTAGTGA GCAGGTTTGT GAACCAATTC GTACGATGAT ATATAGTGCG CCTTTGGAGG ATGCTCGGCA TTTAGTGAAT CTCTATGACA GGCTGAGACA AGAAGTCGAA GCTCAGGCAA CTGATGTACT GAGGAGAAGA TCAAAGTTGA AGGAATCTGA TATTTCTGAA GAAGCATACA TCAAACTTAA GAATTCCGAA TCGAGATTAG CTGAGCTCAA ATCAAGTATG AAAACTCTTG GCAAAGAAGC TACTAAGGCC ATGTTGGAAG TCAACGATCA GCAGCAGAAC GTAACTTCTC AGCGCCTCCG TGCTCTGGTT GAAGCTGAAA GATCATATCA TCGTAATGCT CTTGATATCC TCGACAAGCT ACATTCCGAG ATGATTGCTG AGGAAGAAGC TATAGGATCA TCACCAAAGT CACCAACTTT ACATATAGAG GATAGTGTTT CTCTTCCCCA AGAAGAACCG AATTCAAATC CCTCGGGAGA GATCAAATCA AATCCCTCGG GAAAGATCAA ATCAAGTCGT CGAGAAGAAA TCAAGTCTAA TCCCCAAGAA GTAACCAAAC CCAATCCCAA AGACGAAATG AAGTCCAGTC CCCAAGAAGA AACCAAATCC AATCACCATA AAGAAATCAA GTCTAGTCCA CAGGAAGAGA TCAAGAAGTC CAATGGATCT GATGATCATC ACAACCATCA ACTTCTCAGT CAAAATGATT CCTACTTTCT TGCAAAGGTT GTGCACCCGT TTGATGCTCA AGCCCCAGGG GAACTCAGTC TAGCTGTCGA TGATTATGTA ATTGTGCGAC AGGTGGCTGG GACAGGCTGG TCAGAAGGAG AATACAAGGG CAAAGCCGGA TGGTTTCCGT CGGCTTACGT TGAGAAACAA GAGAAAGCTC CGGCCAGCAA GATTGTGGAA TCAAACCCCA AGCAACAATG ATCCCTTTCT TTAACAAATA C 
Length1361
Protein Sequence
Protein Residue
Map Locationscaffold_1: 15849065.. 15851436
Download Sequence
A.thaliana
AGI-codeAT1G31440.1
DescriptionSH3 domain-containing protein
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
9.16515 Ahg932374 BEL1-like homeodomain 4
12.1244 Ahg472467 phytochrome-associated protein phosphatase type 2C
15.6844 Ahg486516 Protein of unknown function (DUF1639)
16.4317 Ahg946622 basic helix-loop-helix (bHLH) DNA-binding superfamily protein
18.2209 Ahg473992 Vacuolar protein sorting-associated protein 26
22.2486 Ahg950963 auxin response factor 2
24 Ahg493153 SCARECROW-like 13
25.7876 Ahg489377 Ubiquitin-like superfamily protein
27.4773 Ahg939897 aminophospholipid ATPase 1
27.8747 Ahg470307
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression