| Annotation |
|---|
| Description | jgi|Araly1|920712|scaffold_101993.1 |
| Sequence |
TTTCTGAGTT TTCGTAAACC ATGGCTTCTC TCTTTGTATC TACTCCCTCA CCTTCCTTGG CTCTCAAATC CTGTCACAAT TTGCGTCTTC GTCGCTTTGA CAGTCCCATA TTTCAGAAAT TTGGAAAAGC TTATGTGAAT CAGACAAGGA GAAGCAGAAA TCTTTTGAGA TGTTCAGCTG AAGATGATCG AGTTCGTGAA CCTGTGAAGG AAGCTTCGTC TCCGGTGGCG ATAGCGGAGG AGCAAAAGGA GAACCACGCG AGCAATAATG CGCCGCCTTC TCCAGAAAGC AGTGAAGAGG AGGAGGAAAA GAAATCAAAG CAGCAAGAGA TGGACTGGAA AACGGATGAG GAGTTCAAGA AGTTTATGGG AAATCCATCA ATCGAAGCTG CTATAAAGCT TGAGAAGACG AGAACTGATC GTAAGCTCAA GGAGCTGAAC AAGGAAAGCA ACAGTCAGAA TCCGATCATC GGAATTTTGA ACAGCTTGGC TCGTGATACT TTGACTAGAG AGAAAGAAAG ACTTGAGAAA GCAGAAGAGA CTTTCAAGGC TCTTGATCTC AACAAGTTGA AGAGCTGTTT TGGGTTCGAT ACGTTTTTTG CTACGGACGT TCGTCGGTTT GGAGATGGAG GAATCTTCAT TGGGAATCTC AGAAAACCCA TTGATGAGGT CACACCTAAG CTTGAAGCTA AGCTATCTGA AGCAGCTGGG CGTGATGTTG TTGTGTGGTT TATGGAAGAA AGGTCCAATG AGATCACAAA ACAGGTGTGT ATGGTGCAAC CGAAGGCGGA AATCGATTTA CAATTTGAAT CGACTAGATT AAGCACTCCT TGGGGATATG TTAGTGCAAT TGCTTTATGT GTTACAACCT TTGGAACCAT AGCGCTTATG AGTGGGTTTT TCCTTAAACC TGACGCCACT TTTGATGACT ACATTGCTAA TGTAGTTCCT CTTTTTGGCG GGTTCCTTTC CATCTTAGGC GTCTCAGAGA TTGCAACCAG AGTAACCGCT GCGCGACACG GTGTCAGATT AAGCCCATCG TTTCTGGTGC CATCGAATTG GACTGGTTGC TTAGGAGTTA TGAACAATTA CGAGTCATTG CTTCCTAATA AAAAGGCGTT ATTCGATATC CCAGTAGCCC GTACAGCTAG CGCGTACCTG ACCTCGCTTC TGCTTGCAGC AGCTGCGTTT ATATCTGATG GTAGTTTCAA TGGAGGAGAC AATGCTTTGT ATATAAGACC ACAGTTTTTC GATAATAACC CGTTGCTTTC GTTTGTCCAA TTCGTTGTTG GTCCTTATGC GGATGATCTT GGTAATGTAT TGCCTAACGC GGTTGAAGGA GTTGGTGTTC CAGTTGATCC GCTTGCTTTC GCTGGTCTTT TGGGTATGGT AGTGACTTCA TTGAACTTAT TACCATGTGG AAGACTCGAA GGAGGTCGAA TCGCTCAAGC CATGTTTGGA AGAAGCACAG CTGCAATTCT CTCATTTACC ACATCACTCC TTCTCGGTAT AGGAGGTCTC AGCGGAAGCG TCTTATGTTT AGCTTGGGGG CTATTCGCAA CCTTCTTCCG CGGAGGTGAA GAAACACCCG CGAAAGACGA AATCACCCCC CTAGGCGACG ATAGGTTCGC TTGGGGTATA GTCCTTGGAC TCATATGCTT CCTCACTCTC TTTCCTAACA GCGGAGGTAC TTTCTCCACT TCATTCTTCA ATGGACCTTT CTTCCGTGGT GATGATTTCT AAAGAATGTA GATTAAGTTG CA |
| Length | 1762 |
| Protein Sequence | |
| Protein Residue | |
| Map Location | scaffold_1: 7160599.. 7162782 |
| Download Sequence |
|
| A.thaliana |
|---|
| AGI-code | AT1G17870.1 |
| Description | ethylene-dependent gravitropism-deficient and yellow-green-like 3 |
| TAIR curator summary | S2P-like putative metalloprotease, also contain transmembrane helices near their C-termini and many of them, five of seven, contain a conserved zinc-binding motif HEXXH. Homolog of EGY1. Each of the EGY1 and EGY-like proteins share two additional highly conserved motifs, the previously reported NPDG motif (aa 442–454 in EGY1, Rudner et al., 1999) and a newly defined GNLR motif (aa 171–179 in EGY1). The GNLR motif is a novel signature motif unique to EGY1 and EGY-like proteins as well as other EGY1 orthologs found in cyanobacteria. |
| Alias | [ATEGY3][EGY3][ETHYLENE-DEPENDENT GRAVITROPISM-DEFICIENT AND YELLOW-GREEN-LIKE 3] |
| Gene coexpression |
|---|
| MR |
| MR | Locus | Description |
| 3.4641 |
Ahg495334 | heat shock protein 90.1 |
| 5.83095 |
Ahg478284 | ascorbate peroxidase 2 |
| 7.74597 |
Ahg485004 | heat shock protein 17.4 |
| 9.16515 |
Ahg494919 | FKBP-type peptidyl-prolyl cis-trans isomerase family protein |
| 10.247 |
Ahg913155 | |
| 10.6771 |
Ahg928691 | |
| 11.4891 |
Ahg474482 | HSP20-like chaperones superfamily protein |
| 11.8322 |
Ahg945273 | heat shock protein 21 |
| 11.9583 |
Ahg496002 | Undecaprenyl pyrophosphate synthetase family protein |
| 12.7279 |
Ahg893435 | FTSH protease 6 |
|
| RNA-seq |
|---|
Seasonal expression (July 2011 to June 2013) |
|
|
| The four seasons |
|
|
| Growth Chamber expression |
|
|