Detail



ID : Ahg946622

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|946622|scaffold_702851.1
Sequence
TTTCAATGAA CGTTTCAGGA GAAATGGGTC CAAAGTTTTG GGAGAATCAA GAAGATCGAG CGATGGTTGA GTCCACCATA GGCTCTGAAG CTTGCGACTT TTTCATCTCA ACGGCTTCAG CTTCCAACAC TGCCTTGACC AAGCTTGTCT CGCCGCCAAG TGATTCCAAT CTCCAACAAG GGTTACGTCA CGTTGTTGAA GGTTCTGATT GGGATTATGC TATTTTCTGG TTAGCTTCCA ACGTTAATAG CTCCGATGGT TGTGTCTTGA TCTGGGGAGA TGGTCATTGC CGTGTCAAAA AGGGTGTTTC TGGTGAGGAT TATTCGCAGC AAGATGAGAC CAAAAGGCGT GTGCTTCGCA AGCTTCACTT GTCCTTTGTT GGTTCAGATG AGGATCATCG TTTGGTGAAA TCAGGAGCTC TTACTGATCT CGACATGTTT TATCTGGCTT CTTTGTACTT TTCCTTTAGG TGTGATTCTA ATAAGTACGG TCCTGCTGGA ACCTATGTGT CTGGGAAGCC TCTTTGGGCT GCTGACTTGC CTAGCTGCTT GAGTTATTAT AGGGTTAGGT CTTTCTTGGC TAGATCTGCT GGGTTTCAGA CTGTGTTGTC TGTACCAGTG AACTCTGGAG TTGTGGAGCT TGGTTCTTTG AGACATATTC CAGAAGATAA GAGTGTGATT GAGATGGTGA AATCAGTGTT TGGTGGATCT GACTTTGTTC AGGCTAAAGA AGCTCCTAAA ATCTTTGGTC GACAGCTGAG CCTTGGTGGA TCGAAACCTC GGTCTATGAG TATTAATTTC TCCCCCAAGA CGGAGGATGA CACAGGTTTC TCATTGGAAT CGTATGAGGT GCAAGCGATC GGAGGCTCCA ATCAAGTGTA TGGTTATGAG CAAGGGAAAG ATGAGACATT GTATCTAACT GATGAGCAAA AGCCGAGGAA GAGAGGGAGA AAACCAGCAA ATGGAAGAGA AGAGGCTTTG AACCATGTGG AAGCGGAACG GCAGAGGAGG GAGAAGCTGA ACCAGAGATT CTACGCATTG AGAGCGGTGG TGCCTAACAT CTCTAAGATG GACAAGGCTT CGCTCCTTGC GGATGCAATC ACATACATCA CAGATATGCA GAAGAAAATC AGGGTATACG AAACAGAGAA GCAGATAATG AAGAGGAGGG AGAGTAATCA GATAACTCCA GCAGAGGTTG ATTATCAACA AAGGCAGGAT GATGCAGTGG TAAGGCTAAG CTGTCCGTTG GAAACTCATC CCGTTTCAAA GGTGATACAA ACGTTGAGAG AGAATGAAGT TATGCCTCAT GACTCTAATG TGGCTGTCAC AGAGGAGGGT GTGGTTCACA CATTCACTCT CCGGCCTCAG GGTGGCTGCA CCGCCGAGCA GTTGAAGGAC AAGCTCCTTG CCTCTCTATC ACAGTAACTG CTATGTAATA AGTGTGA 
Length1447
Protein Sequence
Protein Residue
Map Locationscaffold_7: 11311185.. 11312631
Download Sequence
A.thaliana
AGI-codeAT4G16430.1
Descriptionbasic helix-loop-helix (bHLH) DNA-binding superfamily protein
TAIR curator summary
Alias[JAM3][Jasmonate Associated MYC2 LIKE 3]
Gene coexpression
MR
MR Locus Description
3.87298 Ahg473638 related to ubiquitin 1
8.83176 Ahg473932
9.69536 Ahg340908 glucan synthase-like 10
11.225 Ahg920353 UBX domain-containing protein
12.4097 Ahg490469 Ubiquitin-like superfamily protein
14.2478 Ahg923242 Signal recognition particle, SRP54 subunit protein
14.2478 Ahg923241 Signal recognition particle, SRP54 subunit protein
15.2315 Ahg488550 Target of Myb protein 1
16.4317 Ahg922633 SH3 domain-containing protein
16.4317 Ahg495042 exocyst complex component 84B
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression