Detail



ID : Ahg923241

Blast(Query) A.halleri   /   A.thaliana (NOT RECIPROCAL)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|923241|scaffold_104522.1
Sequence
TTGAATTCGC AAAGCAGCGA AAATGGTGTT GGCGGAGCTA GGCGGGCGGA TTACCCGCGC GATACAGCAG ATGAGCAATG TGACAATTAT CGATGAGAAG GCTTTGAATG AATGTTTGAA CGAGATCACT CGTGCTCTGC TTCAATCCGA TGTTTCGTTT CCTCTTGTGA AGGAGATGCA GAGTAATATC AAGAAGATCG TCAATCTTGA AGATCTAGCA GCTGGTCACA ACAAACGCCG GATCATTGAA CAGGCTATCT TTAGTGAACT TTGTAAGATG TTGGATCCAG GAAAGCCTGC GTTTGCTCCT AAAAAGGCTA AAGCTAGTGT AGTTATGTTT GTTGGATTAC AAGGTGCTGG AAAGACGACA ACTTGTACTA AGTATGCTTA TTATCATCAG AAGAAAGGAT ACAAACCAGC CCTAGTTTGT GCGGATACTT TCAGGGCCGG TGCTTTCGAT CAGCTGAAAC AGAATGCTAC CAAGGCTAAG ATCCCCTTTT ATGGAAGCTA CACGGAATCC GATCCTGTGA AAATTGCTGT TGAGGGAGTT GATACGTTTA AGAAAGAAAA CTGTGATCTC ATTATTGTTG ATACTAGTGG TCGCCATAAA CAAGAAGCTA CTCTCTTTGA AGAAATGCGT CAAGTTGCTG AAGCAACGAA ACCAGATCTT GTTATATTTG TTATGGATAG CAGTATTGGT CAAGCTGCAT TTGATCAAGC TCAAGCCTTT AAGCAAAGTG TTGCTGTTGG AGCTGTAATT ATTACTAAGA TGGACGGCCA TGCCAAGGGT GGTGGTGCTC TTAGCGCTGT TGCAGCTACG AAAAGTCCTG TGATATTTAT CGGAACAGGA GAGCATATGG ATGAGTTTGA AGTGTTTGAC GTCAAACCAT TTGTTAGCCG TCTCTTAGGA ATGGGTGACT GGTCTGGATT TGTTGATAAG CTACAAGAGG TAGTACCTAA AGATCAACAG CCTGAACTTC TGGAAAAGCT CTCTCAGGGT AACTTTACAT TGAGAATTAT GTACGACCTG TTCCAGAATA TACTGAACAT GGGTCCACTT AAGGAGGTTT TCTCGATGCT GCCTGGAATT AGTGCTGAAA TGATGCCAAA AGGACATGAG AAAGAAAGCC AGGCGAAGAT AAAGCGGTAC ATGACAATGA TGGATTCTAT GACAAATGAT GAACTGGACA GCTCAAACCC AAAGGTGTTT AACGAGTCAC GGATGATGCG GATAGCAAGA GGGTCAGGGA GGCAAGTAAG AGAAGTGATG GAGATGTTGG AAGAGTACAA GAGGCTGCTA GCAAAGATAT GGAGCAAGAT GAAAGGGCTC AAGATCCCAA AGAATGGAGA TATGAGTGCA CTCTCGAGAA ACATGAACGC ACAGCACATG AGCAAGGTCC TACCGCCGCA GATGCTCAAG CAGATTGGTG GCATGGGCGG TCTGCAGAGT CTCATGAAGC AGATGGGTTC CGGCAAGGAC ATGATGGGAA TGTTCGGTGG CGGAGACAAG TAGTTTCTTT CTTGCACACC CAA 
Length1533
Protein Sequence
Protein Residue
Map Locationscaffold_1: 23885013.. 23887812
Download Sequence
A.thaliana
AGI-codeAT1G48900.1
DescriptionSignal recognition particle, SRP54 subunit protein
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
0 Ahg923242 Signal recognition particle, SRP54 subunit protein
2.82843 Ahg487662 Succinyl-CoA ligase, alpha subunit
7.93725 Ahg951466 other RNA
9.8995 Ahg942896 Phosphoenolpyruvate carboxylase family protein
11.6189 Ahg491287 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein
14.2478 Ahg946622 basic helix-loop-helix (bHLH) DNA-binding superfamily protein
14.4222 Ahg486087 GroES-like zinc-binding alcohol dehydrogenase family protein
15.6844 Ahg923648 ZIM-LIKE 2
15.7162 Ahg485198 Peptidase C78, ubiquitin fold modifier-specific peptidase 1/ 2
17.3205 Ahg950246 Uncharacterised protein family (UPF0172)
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression