| Annotation |
|---|
| Description | jgi|Araly1|946761|scaffold_702990.1 |
| Sequence |
TGGTTTATGC TTTATATAAG AAAATGACAA GTATGATCGT GAAGACAACG CCGGAGCTCT TCAAAGGAAA TGGAGTGTAC CGTACGGATC ATCTCGGCGA AAACCGAATG GTTAGTCGAT CAAACCGGCT AGGTGATGGA TCCAACAGTT TCCCTAGAAC CGGTACAATC CATTGCCAAC GGTTAAGCAT AGCAAGAACC GGTTTGCATC GTGATACAAA GGCTCGAGCC ATCCTTGGCC TTGTGTCCGA TCCGGCCGCT TCCATAGCCC AAAAGCGTGT ATTCACCTTT GGGAAAGGAA GAAGCGAAGG CAACAAGGGC ATGAAGTCCT TGTTGGGAGG GAAAGGAGCA AACCTGGCGG AGATGGCGAG CATAGGCTTG TCGGTGCCGC CGGGGCTAAC CATATCTACG GAGGCTTGTC AGCAGTATCA GATCGCCGGC AAGAAGCTTC CAGAAGGTTT ATGGGAAGAG ATCTTGGAAG GTCTTTGCTT CATCGAACGT GACATTGGAG CTTCCCTCGC CGATCCCTCT AAGCCACTCC TCCTCTCTGT TCGCTCCGGC GCCGCCATCT CAATGCCTGG TATGATGGAC ACTGTACTTA ACCTTGGCTT AAACGACCAA GTCGTCGTTG GTTTGGCTGC CAAAAGCGGA GAGCGTTTTG CTTACGATTC GTTCCGGCGT TTTCTTGATA TGTTTGGCGA TGTTGTGTTG GGAATTCCAC ACGCCAAGTT TGAAGAGAAG TTAGAGAGGA TGAAGGAGAG AAAAGGAGTA AAAAATGACA CAGAATTAAG CGCCACTGAT CTTAAAGAAT TGGTTGAGCA GTACAAGAGT GTTTACGTAG AGGCCAAGGG TCAAGAGTTT CCTTCAGATC CGAAGAAGCA ATTGGAGCTA GCGATTGAAG CGGTATTCGA TTCTTGGGAT AGCCCTAGAG CGAACAAGTA CAGAAGTATT AACCAGATAA CCGGATTGAA GGGAACCGCG GTAAACATTC AGTGTATGGT GTTTGGAAAC ATGGGGGACA CTTCAGGGAC TGGTGTTCTC TTCACCAGGA ACCCTAGCAC CGGAGAGAAG AAGCTCTACG GAGAGTTTCT AGTCAATGCT CAGGGAGAGG ATGTGGTGGC AGGGATTAGA ACACCCGAAG ATTTGGATAC AATGAGGAGA TTAATGCCTG AGGCTTATGC AGAACTTGTT GAGAACTGCA ACATCTTAGA AAGACATTAC AAAGACATGA TGGATATCGA ATTCACCGTA CAAGAGGAGA GATTGTGGAT GCTGCAATGT AGAGCGGGTA AGCGAACGGG TAAAGGCGCG GTGAAGATAG CAGTTGATAT GGTAAGTGAA GGGCTTGTAG ATAAATCTTC TGCAATCAAA ATGGTGGAGC CTCAACATCT TGATCAACTA CTTCACCCAC AGTTTCATGA TCCATCGGGG TATCGTGAAA AAGTTGTGGC GAAAGGCTTA CCGGCGTCAC CAGGAGCTGC GGTTGGGCAG GTTGTGTTCA CGGCGGAGGA AGCCGAAGCT TGGCATTCTC AAGGAAAAAC CGTGATTCTA GTTCGAACGG AGACAAGCCC TGATGATGTT GGAGGTATGC ACGCAGCCGA AGGTATATTG ACGGCGAGAG GTGGAATGAC GTCACACGCG GCGGTTGTTG CTCGCGGTTG GGGAAAATGT TGCATCGCTG GTTGCTCCGA AATTCGTGTC GACGAGAACC ATAAGGTTCT ATTGATTGGA GATTTGACTA TTCATGAAGG CGAATGGATC TCGATGAACG GATCAACCGG TGAGGTTATA TTAGGGAAAC AAGCATTGGC TCCTCCGGCT TTGAGTCCAG ATTTAGAGAC TTTCATGTCC TGGGCTGATG CAATCAGACG TCTCAAGGTT ATGGCGAATG CGGATACCCC TGAAGACGCG ATTGCAGCAA GGAAAAACGG CGCTCAAGGG ATCGGGCTTT GTAGGACCGA ACATATGTTC TTTGGCGCAG ATAGGATTAA AGCAGTGAGA AAGATGATAA TGGCGGTAAC AACAGAGCAA AGGAAAGCTT CTCTCGACAT CTTGCTTCCT TACCAACGTT CGGATTTCGA AGGGATCTTC CGCGCTATGG ATGGTTTACC GGTAACAATT CGCCTGTTAG ACCCTCCACT TCACGAGTTT CTCCCGGAAG GCGATTTGGA CAACATTGTA AATGAGTTAG CTGCAGAAAC AGGCGTGAAA GAAGACGAAG TCTTGTCACG AATAGAGAAA CTCTCTGAAG TGAATCCAAT GCTTGGTTTC CGCGGTTGCA GGCTCGGAAT ATCGTATCCT GAGCTAACGG AAATGCAAGC GCGTGCAATT TTTGAAGCAG CAGCGTCAAT GCAGGACCAA GGTGTTACTG TTCTTCCTGA GATTATGGTT CCACTTGTAG GAACTCCTCA GGAATTGGGT CACCAAGTTA ATGTAATCCG AAAAGTGGCA AAGAAAGTAT TTGCTGAGAA GGGTCATACC GTGAGCTACA AGGTTGGGAC AATGATTGAG ATCCCTCGAG CCGCGCTCAT TGCAGATGAG ATTGCGAAAG AGGCGGAGTT TTTCTCGTTC GGGACAAATG ACTTGACGCA GATGACGTTT GGATACAGTA GAGACGATGT TGGCAAGTTT CTACCGATTT ACCTCGCCCA AGGAATCTTA CAGCACGACC CTTTTGAGGT TCTTGATCAG CAAGGTGTAG GGCAATTGAT CAAGATGGCG ACAGAAAAAG GACGAGCAGC TAGGCCTAGC CTCAAGGTTG GGATATGTGG AGAACATGGA GGAGATCCAT CGTCTGTGGG ATTCTTTGCT GAAGCAGGAC TTGACTATGT CTCTTGTTCT CCTTTCAGAG TTCCAATTGC AAGGCTTGCA GCTGCTCAAG TTGTTGCATG ATGAAGAAAA CGTGGTGGCA T |
| Length | 2911 |
| Protein Sequence | |
| Protein Residue | |
| Map Location | scaffold_7: 12018837.. 12025268 |
| Download Sequence |
|
| A.thaliana |
|---|
| AGI-code | AT4G15530.5 |
| Description | pyruvate orthophosphate dikinase |
| TAIR curator summary | Encodes a dual-targeted protein believed to act as a pyruvate, orthophosphate dikinase. These enzymes are normally associated with C4 photosynthesis which does not occur in Arabidopsis. However, PPDK may play a role in remobilizing nitrogen during leaf senescence in Arabidopsis. The product of the long transcript (.1 gene model) was shown to be targeted to the chloroplast, whereas the shorter transcript (no targeting sequence) accumulates in the cytosol. The two proteins were also found to be expressed in slightly different tissues. |
| Alias | [PPDK][pyruvate orthophosphate dikinase] |
| Gene coexpression |
|---|
| MR |
| MR | Locus | Description |
| 1.41421 |
Ahg489859 | Sucrose-phosphate synthase family protein |
| 2.44949 |
Ahg471013 | nicotianamine synthase 3 |
| 2.64575 |
Ahg902749 | cytochrome P450, family 709, subfamily B, polypeptide 2 |
| 3.16228 |
Ahg493510 | Rapid alkalinization factor (RALF) family protein |
| 3.31662 |
Ahg474411 | Peroxisomal membrane 22 kDa (Mpv17/PMP22) family protein |
| 3.87298 |
Ahg495173 | Clp ATPase |
| 4.3589 |
Ahg479799 | ATP sulfurylase 1 |
| 4.89898 |
Ahg474913 | |
| 5.2915 |
Ahg482873 | Protein of unknown function (DUF567) |
| 5.74456 |
Ahg490036 | cytochrome P450, family 706, subfamily A, polypeptide 6 |
|
| RNA-seq |
|---|
Seasonal expression (July 2011 to June 2013) |
|
|
| The four seasons |
|
|
| Growth Chamber expression |
|
|