| Annotation |
|---|
| Description | jgi|Araly1|948486|scaffold_800373.1 |
| Sequence |
AGGTTTCGAG GTACGAAATC ATGAACGATT GCGAAAGGGC TTCGCCAATT GTCTACATCA GCTGTGTAGC CGAGGTACGA TACTCCTTCG TCAGCCACCT CTTGGACGCT CTCAGCCGGA AAGGCATCAA TGATGTGTTT GTGGATAGCG ATGATGTGCT TTCCGAGGAG GCCCAGGGAA AGGTAGAGAG ATCTAAGATT TGTGTGATAG TTTTACCCGG AAACCGTACG GTGTCCCTTG AGAAGCTCGT GAAGGTTCTC GAGTGCCAGA GGAACAACGA CCAGGTGGTG GTGCCGGTGC TGCACGGAGA CGGTCCATTA CAGGGTGAAT GGCTTAGGGA ACTCGAATTG AGGGGATTAT CACCAGTCCA CAGGAAGGAA TGCAGTGACT CCAAACTAGT AGAAGAGATT GTGAGAGATG TGGATGAGAA GCTCTTTTAT ATGGGACGAG TTGGAATCTA CTCAAAGGTG GTGGAGGTAG AAAATATGAT TAACAAGCAA CCGTTGGGCA TCCGCTGTGT TGGAATTTGG GGTATGCCTG GCATAGGCAA GGCTACACTT GCAAAAGCGG TTGTTGACCA GATGTCTGGC GGATTTGATG CTCATTGTTT TATCGAAGAC TATGACACAT CTATTCATGA GAACAGAGTT TATCGTATTT TGGTGGAACA ATTAATGAAA GACGATCCTG GAAATGGCGG TACCATTACG AAGATGAGCT TTGAGGAGAA TCTCCATGAG CTATCAATGA AAGTAATAAA ATATTCTAAT GGAAACCCGT TGGCTATCAG TATTTATGGT AAAGAGCTGA AGGGTAAAAG ACCATCAGAA ATGGAGACTG CATTCCTCCA AATCAAGGGA TATCCTCCTT CTAAGATTGT TGATGCAATC AAGAGCAGCT ATGGTACACT CAGTGACAGT GAAAAGAACA TTTTTTTGGA CATAGCTTGT TTCTTCAAGG GAGACAATGT CGACTATGTG ATGCAACTGC TTGAGGGTTG TGGTTTTTTT CCACGTGTAG GAATCGATGT TCTCGTTGAG AAGTGTTTGG TGACTATTTC AGAAAACCGA GTTGAGATGC ATAATCTGAT CCAGGATGTT GGCCGAGGTA TAATTAATGC CGAAACAGTT GAGATAAAGG GGCACAGCAG ACTGTGGGAA CCTTGGAGTG TCAAATATTT ATCAGAAGAT AATTACTACA AAGCAAATGG AGAACCCGAA ACAACTTTCA AACGTGCTCA GGGCGTTGAA GAGATTGAAT GCATGTTTCT GGACACATCA AACTTAAGTT TTGATGTCAA GCCTGCTGCC TTTGAGAATA TGCTGAACCT TAGATTGCTC AAGATTTACT GTTCCAATAC TGAAGTCCAT CATGAAATCA ATTTCTCCGA AGGCGTTCTC CATTCTCTTC CTAATGAGCT AAGACTCCTA CACTGGGAGA ACTATCCTCT GCAGTATTTG CCTCAAAAAT TTGATCCTAG GAACCTTGTT GAAATTAACA TGCCATATAG TCAACTTCGG AAACTTTGGG GTGGAACCAT TAACCTTGAG ATGTTGAGGA CGATCAAGCT TTGTCATTCA CAGCAACTAG TTAATATTGA CGATCTCTTA AAAGCTCAAA ATCTTGAGGT AATTGATCTC CAAGGTTGTA CAAGCCTTGA GAGTTTCCCA GCAACAAGTC AATTGCTGCA TCTACGAGTT GTCAATCTCT CAGGTTGCTC AAAGATCAAA ATTTTCCCGG AGCTTCCACC AAATATTGAG ACACTGCATC TCCAAGGTAC TGGCATAAGA AAACTACCAA TTAGCCCGAA TGGTGAACAG CTTGGCAGTC TTTCAGAATT CAAAGGTCTC TCACATGCCT TGATACTCAA GCATTTAACA AGCCTGGATA AATGTAGCTC ATCTAGTCAA GATCTTGGCA GGCTTATTTG CTTGGAGCTG AAAGATTGCT CTCGTTTGCG AAGTCTGCCT AACATGGCTC ATTTAGAATT TCTGAATGTT TTTGATCTCT CTGGTTGCTC AAAGCTCAAG ACTATTCGGG GTTTCCCTCC GAACCTGAAA GAGTTATATC TTGTTGGCAC TGCAGTAAGA GAAGTGCCAC AACTTCCTCA AAGTCTAGAA CTCTTGAATG CGCATGGTTC TCGTTTGCAA AGTCTGCCAG ACATGGCTAA TTTAGAATTT CTTAAAGTTC TTGATCTCTC CTGTTGCTCA AAGCTCAAGA TCATTCAGGG TTTCCCACGA AACCTGAAAG AGTTATACCT TGCTGGCACT GGGTTAAGAG AAGTGCCACA ACTTCCTTTA TGTCTAGAAC TCTTGAATGC ACATGGCTGT GTCTCTCAGA AATCAATTCA TTTGGACTCC GAGAAGCCTC CTATGCATTA CACATTCAGT AATTTTTTTG ACCTATCTCC ACATATCGTC AATGATTTTT TCGTGAAAGA TCTCAACAAA GCTCCGACTT TCAGCTTCAG TGCGCCCTCA CATACAAATC AAAATGCCAC ACTTGATCTG CAACCAGGAT CTTCTGTAAT GACACAACTA AATCCTTCTT GGAGGAACAC GCTTGTGGGC TTTGCTATGC TGGTGGAAGT TTCATTTTCA GATGATTACT CTGATGTTAC TGGTTTAGGC ATACGCTGTG TTTGCAGATG GAAAAACGAG GAAGGCCACT CTCAGAGGAT AGAAAGATAT TTGCATTGTT GGGCTACAGG GGAAGCTGTT CCAAATGTTC AAAAGGATCA TACGTTTGTC TTTTGTGATG TCAACATGCG CCCAAGTACC GGTGAAGGAA ATGACCCTGA TATCTGGGCT GACTTAGTTG TATTTGAGTT CTTTCCTATC AATCAGCAGA CAAATTGTCT AAATGATAGT TGCAGAGTGA CAAGATGTGG AGTCTATGTA ATAACCAGTG TTCTAAAAAG CGGTCTAGGC GGTCGCCTAG GCCCCGACTA GGCGCTAGGC TCTCATGCGA CGC |
| Length | 2973 |
| Protein Sequence | |
| Protein Residue | |
| Map Location | scaffold_8: 2103744.. 2107730 |
| Download Sequence |
|
| A.thaliana |
|---|
| AGI-code | AT5G45260.1 |
| Description | Disease resistance protein (TIR-NBS-LRR class) |
| TAIR curator summary | Confers resistance to Ralstonia solanacearum. Similar to NBLS-TIR resistance genes,and also contains similarity to transcription factors. Interacts with pathogen effector protein AvrPop2. |
| Alias | [ATWRKY52][RRS1][SLH1][ARABIDOPSIS THALIANA WRKY DOMAIN PROTEIN 52][RESISTANT TO RALSTONIA SOLANACEARUM 1][SENSITIVE TO LOW HUMIDITY 1] |
| Gene coexpression |
|---|
| MR |
| MR | Locus | Description |
| 2.44949 |
Ahg915590 | Disease resistance protein (TIR-NBS-LRR class) |
| 11.3137 |
Ahg948494 | Disease resistance protein (TIR-NBS-LRR class) |
| 14.8324 |
Ahg313056 | Preprotein translocase SecA family protein |
| 22.3607 |
Ahg484579 | NADPH:quinone oxidoreductase |
| 28.6182 |
Ahg932553 | Protein of unknown function (DUF295) |
| 30.5778 |
Ahg487170 | ABC2 homolog 12 |
| 32.5115 |
Ahg359673 | BRCT domain-containing DNA repair protein |
| 39.8748 |
Ahg491051 | early-responsive to dehydration stress protein (ERD4) |
| 50.01 |
Ahg496788 | |
| 56.5685 |
Ahg488495 | Pentatricopeptide repeat (PPR-like) superfamily protein |
|
| RNA-seq |
|---|
Seasonal expression (July 2011 to June 2013) |
|
|
| The four seasons |
|
|
| Growth Chamber expression |
|
|