| Annotation |
|---|
| Description | jgi|Araly1|948914|scaffold_800801.1 |
| Sequence |
GAAATCTCCG AAAGAGAAGC CATGGATGAA GCTTTGACGA ACGCTTCTGC AATCGGTGAC CAACGCCAGA AAATCGAACA GTACAAACTC ATCCTCTCCT CTGTTCTTTC TTCCAACGAT CTTCTCCAAG CGCAGAGATT CATCGATCAC ATTCTTTCCG ATGATGTCCC GTTGGTGGTT TCGAGGCAGC TTTTGCAATC GTTCGCACAA GAGCTTGGGA GATTAGAACC GGAGACGCAG AAGGAGGTTG CTCAGTTTAC TTTAACCCAG ATTCAGCCTA GAGGTGTTTC CTTTGAGGAA CAGGCACTTA TTATCAGAGA AAAACTTGCC GGTTTGTATG AATCGGAGCA GGAATGGTCT AAAGCGGCGG AGATGTTGAG TGGCATTGAT TTGGATTCTC CAATGAGGGC CGTTGACGAC AATTTCAAGC TTTCAAAGTG TATTCAAATT GCTCGTTTGT ATCTCGAGGA TGATGATGCT GTAAAAGCAG AGGCTTTCAT AAATAAAGCT TCTTTCTTAG TGAGCAGTAG TCAGAATGAA GTTTTGAATT TGCAGTACAA GGTCTGCTAT GCTAGAATTT TGGATATGAA ACGAAAGTTT TTAGAGGCTG CACTTCGGTA TTACGGCATA TCTCAGATTG AGAAACGCCA AATAGGGGAT GAAGAGATTG ATGAGAATGC TTTAGAGCAA GCCCTATCCG CTGCTGTCAC ATGTACCATA TTAGCTGGAG CCGGTCCTCA GCGATCTCGT GTCCTTGCAA CTTTATACAA AGATGAGCGT TGCTCCAAGC TGAAGATTTA TCCTATCCTG CAGAAGGTGT ATCTGGAAAG AATTTTAAGG AGACCAGAGA TTGATGCTTT TTCAGAAGAA CTAAGGCCAC ATCAGAAAGC ATCTTTGCCT GACAAATCCA CTGTTCTAGA CCGTGCTATG ATTGAGCATA ACCTTCTAAG TGCAAGCAAA CTCTACACAA ACATAAGGTT TGATGAATTG GGAACTCTGC TGGGGATTGA TCCAAGAAAG GCGGAGAAGA TAGCAGCTAA TATGATTGGG CAAGACAGAA TGAGGGGTTC CATAGATCAG GAGGAGGCTG TGATACATTT TGAGGATGAC ATTGAGGAAC TACAACAATG GGATCAACAG ATATCTGGAT TGTGCCAAGC TCTCAATGAC ATTCTGGATG GGATGGCCAA GAAAGGCTTG CCTGTTCCTG TCTGATTGAT TCCAAGCTGT GAGAC |
| Length | 1235 |
| Protein Sequence | |
| Protein Residue | |
| Map Location | scaffold_8: 4678389.. 4681499 |
| Download Sequence |
|
| A.thaliana |
|---|
| AGI-code | AT5G42970.1 |
| Description | Proteasome component (PCI) domain protein |
| TAIR curator summary | encodes subunit 4 of COP9 signalosome complex. sequence is similar to a subunit of the 19S regulatory particle of the 26S proteasome. recessive mutation causes derepression of photomorphogenesis. |
| Alias | [ATS4][COP14][COP8][CSN4][EMB134][FUS4][FUS8][CONSTITUTIVE PHOTOMORPHOGENIC 14][CONSTITUTIVE PHOTOMORPHOGENIC 8][COP9 SIGNALOSOME SUBUNIT 4][EMBRYO DEFECTIVE 134][FUSCA 4][FUSCA 8] |
| Gene coexpression |
|---|
| MR |
| MR | Locus | Description |
| 12 |
Ahg937058 | |
| 22.7596 |
Ahg947354 | Endomembrane protein 70 protein family |
| 25.3772 |
Ahg492627 | SWIB complex BAF60b domain-containing protein |
| 27.037 |
Ahg474153 | Protein kinase family protein with ARM repeat domain |
| 30.9839 |
Ahg496588 | DNA binding;nucleotide binding;nucleic acid binding;DNA-directed DNA polymerases;DNA-directed DNA polymerases |
| 32.3265 |
Ahg488797 | GPI transamidase component family protein / Gaa1-like family protein |
| 33.2415 |
Ahg939118 | ARM repeat superfamily protein |
| 40.8901 |
Ahg471065 | F-box and associated interaction domains-containing protein |
| 45.5192 |
Ahg920943 | Regulator of chromosome condensation (RCC1) family protein |
| 45.6946 |
Ahg479780 | rRNA processing protein-related |
|
| RNA-seq |
|---|
Seasonal expression (July 2011 to June 2013) |
|
|
| The four seasons |
|
|
| Growth Chamber expression |
|
|