Detail



ID : Ahg949843

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|949843|scaffold_801730.1
Sequence
TCTTTGCGAA ACTCATCGTC GACGATGAGC ATGGATACAG ACGAAGGGAA GACGGTGATG TGTCTGTTAA CAGACCCAGA AGGAACTCAT TTAGGTTCTG CCATGTATAT TCCTCAAAAT GCTGGTCCTT TGCAACTTAC TCAGCTCGTC AATAGGTTCC TCGACAACGA GGAGATGTTA CCTTACAGTT TCTATGTATC AGACGAAGAG CTTCTTGTAC CTGTTGGAAC TTACTTAGAG AAAAACAAAG TGTCTGTGGA GAAGGTTTTG ACGATTGTTT ATCAACAACA AGCTGTTTTT CGAATTCGTC CAGTTAACCG TTGCTCACAG ACAATTGCTG GTCACGCGGA AGCTGTTCTT TGTGTTTCGT TTAGTCCTGA TGGTAAGCAG TTAGCTAGTG GTTCAGGTGA TACTACTGTC AGGCTTTGGG ATCTCTACAC TGAAACTCCA TTGTTTACTT GCAAAGGGCA CAAGAATTGG GTTCTCACAG TTGCGTGGTC TCCGGATGGT AAGCATCTTG TGAGTGGTAG TAAATCCGGT GAAATCTGTT GTTGGAATCC AAAGAAAGGA GAACTAGAAG GCAGTCCACT TACAGGTCAT AAGAAATGGA TTACTGGTAT CTCGTGGGAA CCAGTCCACC TTAGTTCTCC ATGCCGTCGA TTTGTAACTT CTAGTAAAGA TGGGGATGCA AGGATTTGGG ATATTACACT GAAAAAATCT ATAATTTGTC TCAGTGGACA CACTCTTGCT GTGACTTGTG TCAAATGGGG CGGAGATGGA ATTATTTATA CAGGTTCCCA AGATTGTACG ATAAAGATGT GGGAGACTAC TCAGGGGAAG CTCATTCGTG AATTGAAGGG GCATGGGCAT TGGATTAACT CCCTTGCATT GAGCACAGAA TATGTTCTTC GAACAGGAGC TTTTGACCAC ACTGGAAGAC AATATCCTCC AAATGAAGAA AAGCAAAAGG CGCTCGAAAG ATACAACCAA ACAAAAGGGG ATTCCCCTGA AAGATTAGTT TCAGGTTCTG ATGATTTCAC TATGTTCCTT TGGGAACCAT CTGTTAGCAA ACAACCTAAA AAGCGCTTGA CCGGCCATCA ACAACTTGTA AATCATGTCT ATTTCTCACC TGATGGGAAA TGGATTGCAA GTGCATCGTT CGATAAATCA GTTAGGCTAT GGAATGGTAT CACAGGACAA TTCGTTACAA CTTTCCGGGG CCATGTTGGA CCTGTGTATC AGGTCAGTTG GTCCGCAGAC AGTAGATTGC TATTGAGTGG CAGTAAAGAC TCTACTCTCA AGATATGGGA AATTAGGACT AAAAAGTTAA AACAAGATCT TCCTGGTCAT GCAGATGAGG TTTTCGCGGT GGATTGGAGT CCAGATGGTG AGAAAGTAGT TTCTGGTGGT AAAGATAGAG TTTTGAAGCT ATGGAAGGGT TAAAATGGAA CATCATTTTG GAGT 
Length1464
Protein Sequence
Protein Residue
Map Locationscaffold_8: 14366105.. 14368900
Download Sequence
A.thaliana
AGI-codeAT5G52820.1
DescriptionWD-40 repeat family protein / notchless protein, putative
TAIR curator summary
Alias[AtNLE][NLE][NOTCHLESS]
Gene coexpression
MR
MR Locus Description
6 Ahg904413 phosphoesterase
10.9087 Ahg478024 GTP-binding family protein
14.5602 Ahg484065 SEC12P-like 2 protein
16.4317 Ahg919663 pseudouridine synthase and archaeosine transglycosylase (PUA) domain-containing protein
17.0294 Ahg496396 DEAD box RNA helicase (PRH75)
23.2379 Ahg939120 Ribosomal protein S13/S15
23.8747 Ahg919125 Ribosomal L28 family
28 Ahg925362 Transducin/WD40 repeat-like superfamily protein
28.1425 Ahg488918 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein
28.775 Ahg344719 CCCH-type zinc fingerfamily protein with RNA-binding domain
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression