Detail



ID : Ahg949894

Blast(Query) A.halleri   /   A.thaliana (NOT RECIPROCAL)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|949894|scaffold_801781.1
Sequence
TTTCACTAAG AAAATATTTA AATGAGAAAA GGAAAAACAC ACACACACGC ATTAATTGAG AAGAATGAGA AGTTGGCTAT TCCTAGAAGA GCTCGTTACG CAATAGCCAT AGCCGCCGGA ATCCCAGGAG CTTTGATCGT CTTTGGTCTT TTCTGTTTCA TTTACAGCAA AATCAGTTCA TGCATTAAAC GACGCCGTCT CGTCCCAAGT CCAGAGATCA ACAACGCTCA AGCCCATTAT TTACATTCTA GTGTCAACGT AATGGGCCTT GATGGGCCAA CTATAGAGTC ATACCCCAAA ATAGTATTGG GAGAGAGCAA AAGGTTGCCC AAAGTAGATG ATGCTACGTG TGCTATTTGT CTATCGGAGT ATGAGCCAAA GGAGACGCTT CGGACAATTC CAACGTGTCA ACATTGTTTT CATGCTGATT GTATCGACGA GTGGCTGAAA TTGAATGGGA CTTGTCCGGT GTGTCGGAAC TCTCCGGAGC AGATTTTTCC GCCTGAGAAC TATAATTCTT AAGCTAGTCT CTAATTTTGT GT 
Length542
Protein Sequence
Protein Residue
Map Locationscaffold_8: 14579297.. 14580380
Download Sequence
A.thaliana
AGI-codeAT5G53110.1
DescriptionRING/U-box superfamily protein
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
16.8523 Ahg492497 cation/H+ exchanger 17
33.7639 Ahg489442 Protein kinase family protein with leucine-rich repeat domain
39.6863 Ahg480771
52.2494 Ahg904520
53.3854 Ahg495378 RING/U-box superfamily protein
56.745 Ahg918888 Chitinase family protein
57.7927 Ahg492857 VACUOLAR SORTING RECEPTOR 7
58.155 Ahg327935 Cupredoxin superfamily protein
62.2093 Ahg921472 Matrixin family protein
63.1427 Ahg894427 SPFH/Band 7/PHB domain-containing membrane-associated protein family
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression