Detail


ID : Ahg950171

Blast(Query):  A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|950171|scaffold_802058.1
Sequence
GTATAATCTG ATAAAAGTAA GATGTCTGCT ACTCAGGAAG AAGACAAGAA GCCTGACCAA GGAGCTCACA TCAATCTCAA AGTCAAGGGA CAGGATGGTA ATGAAGTCTT TTTTAGGATC AAGAGAAGCA CTCAGCTCAA AAAGCTGATG AATGCTTACT GTGACCGTCA GTCTGTGGAT TTCAACTCAA TTGCTTTCTT GTTTGATGGT CGTCGTCTTC GTGCAGAGCA GACTCCAGAT GAGCTTGAAA TGGAAGATGG AGATGAGATT GATGCAATGC TTCATCAGAC TGGTGGTGCT GCTAATGGCC TGAAGCTGTT CTGCTTTTAG TGGCTATTTT AATGGTTTTC CATAAGATTG TGTGATATTA ATGGATTTAG TGAATCGGCT TTAGATTAAA TTTGGCAGGC TTTGTTTTAC TTTGACCAGT TTC
Length433
Protein Sequence
Protein Residue
Map Locationscaffold_8: 15903454.. 15904632
Download Sequence
A.thaliana
AGI-codeAT5G55160.2
Descriptionsmall ubiquitin-like modifier 2
TAIR curator summaryEncodes a small ubiquitin-like modifier (SUMO) polypeptide that becomes covalently attached to various intracellular protein targets, much like ubiquitination, leading to post-translational modification of those targets. SUMO2 can form SUMO chains through lysine residue 10 during in vitro assays.
Alias[ATSUMO2][SUM2][SUMO 2][SUMO2][SMALL UBIQUITIN-LIKE MODIFIER 2][small ubiquitin-like modifier 2]
Gene coexpression
MR
MR Locus Description
1 Ahg473768 UDP-Glycosyltransferase superfamily protein
6 Ahg488046 Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase family protein
9.79796 Ahg481429 Protein kinase family protein
11.3137 Ahg491436 La protein 1
12.2474 Ahg497291 Rab5-interacting family protein
12.2474 Ahg481820 Rab5-interacting family protein
15.0997 Ahg489607 Protein of unknown function, transmembrane-40
16.9115 Ahg487758 Tetratricopeptide repeat (TPR)-like superfamily protein
18.4391 Ahg488026 SCP1-like small phosphatase 5
22.4944 Ahg328588 Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression