Detail



ID : Ahg950248

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|950248|scaffold_802135.1
Sequence
GACACAGAGA GATTTGATTG ATGGAATTGG TCCCGTACGA TTCGGAGACG AAATCATCGA TCCCTACAAA TCTCGCGTGG CAAGAGATGT TTCGTTCCGC TTCATCGCGT AAACCTCAAG ACCCTCCGTC TTCTTCTTCA TCGCCACCGC GTAAACCTTC CGGCGATGGA TCATCATCCG GCAAAACATC TTTATCAACC GCTGATTCAC AAGCACGTCT CGCTATGTAC ATAGCAATGG CTCACGCTGG TCTCGTTTTC GCCATTTGTG TTCTGTATTT CGTTGGAAAG CTATTACAAG AGTATCTAAG ACCGATTCAA TGGGCGATTC TCTGTTCGAT TCCGTTACGA GGTATTCAAG AAACCCTTGT TGATTTCTGG AGTGAGCCTT TGAAATTAGG GCTAACGGAA GTTGTTCTCG CTGTTCCTGT TTCTGTCTTC AATGTTTTCA TCGGATCCAT TGTGGATATT AAAAATCTCT GCTTTAGGGT TTTTCTTAGG AGATCGAAAC CTAAGAGAAC GAGGAAGAAG AACGGTACTG GGTTTTCCAA ATTGGTTAGA TGGTTAGTCT CTTTTGGTGT CTTTGTCATT GCTTATGAGA GGATTGGGGG AATTGGGTCT CTTGTGATTC TCTCTTTAGG GTTTTTGTTT AGTTCCAAGA ATGTCGATTC GTCTCTCTCT GCGGTTTCTT CTCTGAGGAG TAATAGTTTT AGGAGAAGCT ATTTCACTGC TTATTTCACT AGAGGGATAA TGAAGAGATT GAATACAATT GTTGCTATTG GTTTGATTGT GCTTATGATT GTTGGTTCTT TGACTGGTGT CATCTTCTTC TCGTATAAGA TCGGTGTTGA AGGGAAAGAC GCGGTTTATT CTTTAAAATC TCATGTTGAA GAGAGTAATT ACGCTGAGAA GATTGGAATC AAGCAATGGA TGGATGAGAA TGATGTTCCT GGAATGGTGG ATATGTATAC GACGAAGTTT TATGAAACGG TTTCTGAGCA GATTGATAGT TTGGCAATGC AGTATAATAT GACGGAGTTA GTCACGGGGA TTAAGCATTT CGTGATCGGG CATCCTCAGA ACACGTCGAC ACCATCTACG GCGCTTATAA CTCCGTCTCC TTATACAGAG AAGCTCATGA GTTTGAGGAC TCGGGTTAAG AATCGAGAAT GGAGTCAGAT CTACTCGGAG GTTGATGTGA TTTTCAGGGA GCTTATTATC ACAAGAGAAG ATTTGGTGGA GAAAGCTAAA GGCTTTGCTG TTAAAGGAAT GGATGTATCT CAACGGGTTT TCTCAAGCAG CGCATCAGTT GTTGGAGGCG GTGCTAAGTT CGTTTTCTCT ATTGGAAACT TGATAATCTC GGGAGCAGCA GAGTTTTTCA ACTTTATCTC TCAGCTAATG GTTTTCATTT GGGTTTTATA CATTCTAATC ACATCAGAAT CAGGTGGTGT GACTGAGCAA GTCATGAACA TGCTCCCGAT CAACGCAAGT GCTAGAAACA GATGTGTCGA AGTCCTAGAC TTAGCGATCT CCGGCGTGCT TTTAGCAACA GCGGAAATCG CCTTCTTCCA AGGATGTCTC ACTTGGCTAT TGTTTAGACT ATACAATATA CATTTCCTTT ACATGTCGAC CGTTCTTGCC TTCATCAGTG CTCTGTTACC GATTTTCCCT TACTGGTTTG CGACAATCCC AGCGGCTTTG CAACTAGTGC TAGAAGGAAG ATACATTATT GCAGTTACTC TATCTGTGAC TCATCTTGTG CTAATGGAGT ATGGTGCTTC AGAGATTCAA GATGACATTC CTGGGTCCAA TGCTTACATT ACTGGACTAA GTATTATTGG TGGAGTGACT CTGTTTCCTT CTGCTCTCGA GGGAGCGATA ATGGGACCGT TGATAACGAC GGTGGTGATT GCTTTGAAGG ATCTATATGC AGAGTTTGTT CTGAATGATC CAAAGAAGAT CAATTAGATC TTATTGGTTT CTTTGATAG 
Length1989
Protein Sequence
Protein Residue
Map Locationscaffold_8: 16206050.. 16208115
Download Sequence
A.thaliana
AGI-codeAT5G55960.1
Description
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
5.74456 Ahg473495 Protein prenylyltransferase superfamily protein
7.48331 Ahg495592 SWAP (Suppressor-of-White-APricot)/surp domain-containing protein
8.12404 Ahg320274 Transcriptional factor B3 family protein
10.198 Ahg493040 Cytochrome b561/ferric reductase transmembrane protein family
15.9687 Ahg952051
16.0624 Ahg483223 apurinic endonuclease-redox protein
16.2481 Ahg495713
18.0555 Ahg925426 phosphate transporter 4;1
21.166 Ahg944394 Basic-leucine zipper (bZIP) transcription factor family protein
23.4521 Ahg486092 RNA-binding (RRM/RBD/RNP motifs) family protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression