| Annotation |
|---|
| Description | jgi|Araly1|950270|scaffold_802157.1 |
| Sequence |
GAGGAAGGTT GAGAACAAAA ATGGAGGAGA CGACGATTCC TTTCAAGAGC TTACATAGCA GAGAATATCA AGGTCACAAG AAGAAGGTAC ATTCTGTAGC TTGGAATTCT AATGGAACAA AGCTTGCTTC GGGTTCTGTT GATCAAACGG CTCGCATTTG GAACATTGAA CCTCACGGTC ATAGTAAGGC TAAGGACCTT GAACTAAAGG GACATACTGA TAGTGTGGAT CAGCTATGTT GGGACCCCAA ACATTCAGAT CTTGTTGCTA CTGCCTCTGG TGATAAAAGC GTTCGTCTCT GGGATGCTCG CAGTGGAAAA TGCACACAGC AGGCCGAACT TAGTGGAGAG AATATAAACA TCACCTACAA ACCTGACGGG ACACATGTAG CTGTTGGTAA TAGGGATGAT GAGCTTACCA TTCTGGATGT CCGTAAGTTT AAACCTCTAC ACAGACGCAA ATTCAATTAT GAGGTTAATG AGATTGCTTG GAACATGCCA GGAGATTTTT TCTTCTTGAC TACTGGACTT GGCACTGTTG AAGTTCTTTC ATATCCGTCT CTTAAACCAC TTGACACTCT CACAGCCCAC ACAGCCGGGT GTTATTGTAT TGCAATTGAT CCTAAAGGGA GATATTTTGC TGTCGGGAGT GCGGATTCCT TAGTCAGCCT TTGGGATATC TCAGACATGC TTTGTTTGAG AACATTTACC AAACTTGAGT GGCCCGTCAG AACAATAAGC TTCAACTATT CGGGAGAGTA TATTGCTTCA GCCAGTGAAG ATTTATTCAT TGATATTGCT AATGTCCAAA CCGGGCGGAC GGTGCATCAG ATTCCATGTC GGGCTGCCAT GAACAGTGTC GAGTGGAATC CCAAATACAA TTTACTTGCA TATGCAGGTG ATGACAAGAA TCCCAAGTAT AATACTGATG AAGGTGTTTT CCGGATATTT GGTTTTGAGA GCTCGTAGAA ACAGAACACT GCATCAGG |
| Length | 988 |
| Protein Sequence | |
| Protein Residue | |
| Map Location | scaffold_8: 16305441.. 16307800 |
| Download Sequence |
|
| A.thaliana |
|---|
| AGI-code | AT5G56130.1 |
| Description | Transducin/WD40 repeat-like superfamily protein |
| TAIR curator summary | Encodes a component of the putative Arabidopsis THO/TREX complex: THO1 or HPR1 (At5g09860), THO2 (At1g24706), THO3 or TEX1 (At5g56130), THO5 (At5g42920, At1g45233), THO6 (At2g19430), and THO7 (At5g16790, At3g02950). THO/TREX complexes in animals have been implicated in the transport of mRNA precursors. Mutants of THO3/TEX1, THO1, THO6 accumulate reduced amount of small interfering (si)RNA, suggesting a role of the putative Arabidopsis THO/TREX in siRNA biosynthesis. |
| Alias | [AtTEX1][TEX1][THO3] |
| Gene coexpression |
|---|
| MR |
| MR | Locus | Description |
| 2.82843 |
Ahg929810 | protein disulfide isomerases |
| 5.2915 |
Ahg490751 | |
| 9.59166 |
Ahg477773 | Domain of unknown function (DUF3444) |
| 14.0357 |
Ahg491167 | P-loop containing nucleoside triphosphate hydrolases superfamily protein |
| 15.4919 |
Ahg496554 | ENTH/VHS/GAT family protein |
| 24.8193 |
Ahg488237 | Aspartate kinase family protein |
| 25.7682 |
Ahg922568 | Protein of unknown function (DUF616) |
| 31.8591 |
Ahg486320 | Protein of unknown function (DUF1637) |
| 32.3728 |
Ahg327675 | pentatricopeptide (PPR) repeat-containing protein |
| 34.1614 |
Ahg490654 | FMN-linked oxidoreductases superfamily protein |
|
| RNA-seq |
|---|
Seasonal expression (July 2011 to June 2013) |
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| The four seasons |
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| Growth Chamber expression |
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