Detail



ID : Ahg922568

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|922568|scaffold_103849.1
Sequence
TTCTCATCGT CGACGACAAT GCTAAAATGG CTCAATTTAG ACAATCGGAG AGATTTAGTG TTCGCGGCGG CGGAGCAGCT TCTTCTGATC ACGTAACGAT CGGGATCCGA AACGGCGTCG GTGGAGCTAA AGGTAACAAC AACAACCGGT GGCGACGATC CGTGAGAGCT GATAAGATTC GTCGACTTGG AATCGGTTCT GTTGTGTTTG TTCTTTGCTT TGTGCTTGTT GTTACTCTTC TCGCTTACTA TTATATCTCT GGGTTTACTT ATAATAGCTA CGATGATAAA GGATTTGTTG ATTCATATGA AGGTGATTTT TTGACGAATG TGACTAGAAT AGATCCTTCG AAAGTGCTTG AGTTTGGTCA AGGTTCAGTG ATTCATGGAC GAGATTCGAG GTATTGGGAT AAAGATGATA GAAGAAGAGA TGATGATTAT AATGAGGATG AAGTGAAAAA GGATGTACAA GTTCACAATC CTGTGAAAGG GATTGGTTTG TATAATGAAG CTGGAAGGAA TGAGTTAAAG ATGTATGAAG CTGAGTATCA AGCTACGCTT GGGAAAGGTG GTCATGAGAG AAACGGTGTG CAGCGTCATG AGGGTGTTGA TATGGATCGT GAGGATGATG ATGGGATTGA TTCTCATGAT GGGGATGAAT ATGTTGATTC TGGGCATGAG GATGAGAATG AAGAGGCGCA TAAAGAGAAG GTTGGTGAGG TTGTTCATAT GGTGACTAAG CAAGAGAATA TGGAGAAGGA TGATGGAGGT ATTTCAAAAA GGTCACTTGG GGATTCTTAT CTTGTTAGTA AGGGTGGTAA GTCCGGGAAA ACATCACGGT CTGATACAAA GAGAAGAGGT CGTCGCAGAT CTTCAGGTTC ATGTGAAATG AAGCTATTGA ATTCGAGTCA ACAAATAGTG GAGCCCTTGA ATACTCGAAA ATCTGCTAGA TTCTCTTTAC AGTACATAGA GAAGGAAGAT AAGCCTGATG GAGAAGAACA GTGGGAGCCT AGATTTGCAG GTCATCAGAG TTTACAGGAG CGAGAAGATT CCTTCGTGGC TGAAGACAAG AAAATTCATT GTGGCTTTGT CAAAGGCCCC AAAGGATCTC CAAGCACTGG ATTTGACCTG ACAGAAGATG ATACTAATTA TATCAGTAGA TGCCACATCG CTGTGATCTC ATGTATCTTT GGCAATTCTG ATCGCTTGAG GCCTCCTGCC AACAAAATGA TAAGTAGGTT GTCAAGAAAA AATGTGTGCT TCATTGTGTT TGTGGACGAG ATTACCATGC AAACACTTTC TGCAGAAGGA CATGCCCCAG ACAGAGCAGG ATTCATTGGT CTGTGGAAGT TGGTTGTCGT GAAGAATCTT CCTTATGCAG ATATGCGGAG GGTAGGAAAA ATACCAAAAA TGTTGCCACA CCGACTTTTC CCATCAGCAA GGTACTCAAT CTGGTTGGAC AGCAAGTTAC GACTTCAGTT GGACCCACTG CTCATTCTGG AGTACTTTCT ATGGCGTAAA GGTCACGAGT ATGCTATATC CAATCACTAT GACCGTCATT GTTTATGGGA AGAGGTTGCA CAAAACAAGA AGCTGAACAA GTATAACCAT ACTGTTATTA ATCAACAGTT TCAGTTTTAC AAGGCTGATG GGCTAACCAG ATTCAACGCG TCGGATCCGT TCAAGCTTCT TCCTAGCAAT GTTCCAGAGG GGTCTTTCAT AGTACGAGCT CATACTCCCA TGTCGAATCT ATTCTCTTGT CTTTGGTTCA ATGAAGTAGA ACGCTTCACT CCCCGGGACC AGCTGAGCTT TGCCTATACT TACCAGAAAC TAAGAAGGAT GAATCCTGAT AAACCATTTA ATCTTCACAT GTTCAAGGAC TGTGAGAGAA GAAAGATTGC AAAGTTGTTC CGTCACAGAT CAGACGAGAA GCGAAACCTT ATACAAGCAG CAATACAATA AACAACTCTA TGTTGTACCG A 
Length1981
Protein Sequence
Protein Residue
Map Locationscaffold_1: 15505110.. 15508947
Download Sequence
A.thaliana
AGI-codeAT1G34550.1
DescriptionProtein of unknown function (DUF616)
TAIR curator summary
Alias[EMB2756][EMBRYO DEFECTIVE 2756]
Gene coexpression
MR
MR Locus Description
5.56776 Ahg475917 microtubule-associated proteins 70-1
22.4499 Ahg479606 Cell differentiation, Rcd1-like protein
22.9783 Ahg927512 structural molecules
23.2379 Ahg946393 phytochrome E
25.7682 Ahg950270 Transducin/WD40 repeat-like superfamily protein
27.4591 Ahg327303 Protein of unknown function (DUF810)
31.5278 Ahg920552 Tetratricopeptide repeat (TPR)-like superfamily protein
38.1445 Ahg314839 ARM repeat superfamily protein
53.1601 Ahg496743 ENTH/VHS family protein
56.116 Ahg484660 myb domain protein 30
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression