| Annotation |
|---|
| Description | jgi|Araly1|950941|scaffold_802828.1 |
| Sequence |
GGTCTTAGCC AATCACCAAC ATGGCGACTG GGGCAGCAAC TGAGAACCAG TGGCTCAAAG GGAGAGTGAA GGCTGTTACC TCCGGAGACT GCTTGGTGAT CACGGCTTTG ACCCACAACA GAGCTGGCCC ACCTCCTGAA AAGACCATCA CTCTTTCTTC TCTTATGGCT CCTAAAATGG CTCGCAGGGG AGGTATAGAT GAGCCTTTTG CATGGGAAAG CAGGGAGTTT CTGAGGAAGC TTTGCATTGG AAAGGAGGTT GCTTTCAAAG TGGATTACAA AGTGGAAGCT ATTGCCGGAA GAGAATTTGG CTCGGTTTAT CTTGGTCACG AAAATCTTGC TAAGCTTGTT GTTCAAAATG GCTGGGCAAA GGTCAGAGGG CCAGGTCAGC AGAATCAGGA TAAGGTTAGT CCTTACATTG CGGAGCTGGT ACAGCTTGAA GAGCAGGCTC AGCAGGAAGG ATTTGGTCGT TGGAGCAAGG TTCCTGGTGC TGCTGAGGCA TCTATCAGAA ATCTTCCTCC TTCTGCTGTT GGAGATTCTG GCAATTTTGA TGCTATGGGT CTTTTAGCCG CAAGTAAAGG CAAACCCATG GAAGGTATTG TTGAGCAAGT CCGTGATGGC AGTACCCTTC GGGTTTATCT TCTTCCGGAA TTTCAGTTTG TGCAAGTATT TGTTGCTGGA CTCCAGGCTC CATCGATGGG AAGGAGACAA TCTACACAAG AAGCTGTTGT TGAGCCGGAT GTTACAGCAA CTTCGAATGG AGATGCTTCT GCTGAGACGC GTGGTCCTCT AACATCAGCT CAGAGACTCG CTGCCTCAGC AGCATCGTCT GTTGAGGTTT CCTCTGATCC GTTTGCAATG GAAGCCAAGT ACTTTACTGA GCTTCGTGTG CTTAATAGAG ATGTTCGTAT TGTTCTTGAA GGCGTTGACA AATTCAACAA TCTGATTGGG TCAGTATACT ATTCCGATGG GGATACAGTT AAAGACTTGG GTTTGGAGCT GGTTGAAAAT GGTCTTGCTA AGTACGTTGA GTGGAGTGCC AACATGTTGG ATGAAGAAGC CAAAAAGAAA TTGAAAGCTA CAGAACTCCA ATGCAAGAAA AACCGGGTGA AAATGTGGGC AAACTATGTC CCTCCAGCTA GCAACTCTAA GGCAATTCAT GACCAGAACT TTACCGGAAA GGTAGTGGAA GTTGTGAGCG GGGACTGCTT AGTAGTTGCT GATGATTCTA TCCCATTCGG AAGCCCAATG GCAGAGCGCA GAGTTTGCCT TTCCAGTATT AGGGCTCCTA AAATGGGTAA CCCACGCAGA GAGGAGAAAC CTGCCCCTTA TGCGTGGGAA GCCAAGGATC TTCTGAGACT AAAGCTTATC GGAAAGGAGG TTATTGTTCA AATGGAATAC TCAAGGAAGA TTAGCCCAGG AGATGGTGTT ACTACTTCTG GAGCTGGTGA TAGGGTCATG GATTTTGGCT CAGTGTTCCT TCCATCCACT ACCAAGGGTG ATGCAGATGT AGCAGCTGCA GCAACTCCTG GAGCGAATAT TGCTGAACTC ATTATTGCCC GTGGCTATGG GACTGTGGTT AGACATCGTG ACTTTGAAGA GAGATCGAAC CATTATGACG CTCTCCTGGC TGCTGAAGCT CGTGCTGTTG CTGGGAAGAA GGGAATCCAT TCTGCAAAGG ATTCTCCAGC CATGCACATT ACAGACCTGA CTGTGGCCTC GGCGAAGAAG GCTAAAGATT TCCTGCCATC CCTGAGCAGA GGCAAGAGAA TATCTGCCGT TGTGGAATAT GTCCTGAGTG GACATCGGTT CAAGCTATAC ATTCCAAAGG AAACGTGCAG CATTGCCTTT GCATTCTCTG GTGTCAGATG TCCTGGCCGT GGCGAACCCT ATTCGGAAGA AGCTATTGCT TTAATGAGAC GTAAAATCAT GCAGAGAGAT GTCGAGATTG TAGTTGAAAC TGTGGATAGA ACCGGTACTT TCTTGGGATC AATGTGGGAG TCAAAGACCA ACGCAGGAAC GTATCTTCTT GAAGCTGGCC TGGCAAAAAT GCAGACTGGC TTTGGTGCAG ACAGGATTCC CGAAGCTCAT ATTCTTGAAT TGGCAGAGCG ATCTGCTAAA AATCAGAAAC TGAAGATTTG GGAAAACTAT GTTGAAGGAG AGGAAGTCGT AAACGGTAGT TCTAAAGTAG AAACCAGGCA GAAGGAAACA TTAAAGGTTG TTGTTACGGA AGTACTTGGA GGCGGTCGAT TCTATGTTCA GACGGTTGGT GATCAAAAAG TAGCTTCGAT TCAAAACCAG CTTGCATCTC TGAGTCTTAA AGATGCTCCC ATTATTGGAT CATTTAATCC TAAGAGGGGT GACATCGTCC TTGCACAGTT TAGCCTTGAT AACTCCTGGA ACCGTGCAAT GATTGTTGAT GGACCTCGAG GAGCAGTTCA ATCTCCAGAA GAGAAATTCG AAGTGTTCTA CATCGATTAT GGAAACCAAG AAACGGTTCC ATACAGCGCA ATTCGCCCTG TGGACCCTTC AGTATCCTCA GCACCAGGGC TCGCACAGCT CTGCAGACTT GCCTACATAA AAGTTCCAGG CCTGGAAGAG GACTTTGGTC CTGATGCCGG AGAGTATTTG CATACCGTAA CACTCGGAAG TGGTAAAGAG TTCAAGGCAG TGGTAGAGGA AAGAGATACT TCAGGAGGCA AAGTGAAGGG CCAAGGAACT GGAACCGAGC TTGCTGTAAC TCTCATCGCT GTCGATGATG AGATCTCTGT CAATGCAGCA ATGCTTCAGG AAGGAATAGC GAGGATGGAG AAACGCAGGA AATGGGAACC GAAAGACAAG CAAGCTGCTC TTGATGCACT TGAGAAGTTC CAAGACGAAG CTCGCAAATC TAGGACCGGA ATCTGGCAGT ACGGAGACAT CCAATCTGAT GATGAGGACA CTGTTCCAGT CAGGAAACCG GGTCGCGGGT AAGTGTTTCA CAGCGGTGAA AA |
| Length | 2992 |
| Protein Sequence | |
| Protein Residue | |
| Map Location | scaffold_8: 18969309.. 18973910 |
| Download Sequence |
|
| A.thaliana |
|---|
| AGI-code | AT5G61780.1 |
| Description | TUDOR-SN protein 2 |
| TAIR curator summary | Involved in the regulation of AtGA20ox3 expression, as well as seed germination. |
| Alias | [AtTudor2][TSN2][Tudor2][Arabidopsis thaliana TUDOR-SN protein 2][TUDOR-SN protein 2] |
| Gene coexpression |
|---|
| MR |
| MR | Locus | Description |
| 8.3666 |
Ahg929672 | transducin family protein / WD-40 repeat family protein |
| 10.583 |
Ahg941550 | regulatory particle triple-A ATPase 6A |
| 12.4097 |
Ahg496924 | succinate dehydrogenase 1-1 |
| 14.8324 |
Ahg472949 | adenine phosphoribosyl transferase 1 |
| 16.4317 |
Ahg941263 | phosphoglucosamine mutase family protein |
| 21.8174 |
Ahg494623 | Aluminium induced protein with YGL and LRDR motifs |
| 23.3238 |
Ahg899203 | Class II aaRS and biotin synthetases superfamily protein |
| 32.7719 |
Ahg945681 | NAD(P)-binding Rossmann-fold superfamily protein |
| 34.0734 |
Ahg481620 | conserved peptide upstream open reading frame 6 |
| 36.0832 |
Ahg928783 | Single-stranded nucleic acid binding R3H protein |
|
| RNA-seq |
|---|
Seasonal expression (July 2011 to June 2013) |
|
|
| The four seasons |
|
|
| Growth Chamber expression |
|
|