Detail



ID : Ahg941550

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|941550|scaffold_602094.1
Sequence
TTTGCTGCAA TCACTGAGAA AATGGCAGCC GTAGGAGTTG ATTCGAGGCG TCCTGAGACA GCGATGGAGG AAACCTGTAA CGTGAAAGGA GCGGCGGCGA AACAAGGGGA AGGGCTTAAG CAGTACTATC TCCAGCACAT CCATGAGCTC CAGCGCCAGC TCCGCCAGAA GACTAATAAC CTCAATCGCC TTGAAGCTCA GAGGAACGAA CTCAATTCCA GAGTAAGAAT GCTCAGAGAA GAGTTGCAGC TGCTTCAAGA ACCTGGGTCC TATGTGGGTG AAGTGGTAAA AGTGATGGGA AAAAACAAGG TCTTGGTTAA GGTTCATCCA GAGGGAAAGT ATGTTGTTGA TATTGACAAA AGTATAGATA TAACAAAAAT CACTCCATCC ACGAGAGTTG CTCTTCGTAA TGATAGCTAT GTTCTCCACC TGGTCTTGCC AAGTAAAGTA GATCCGCTGG TTAACCTTAT GAAAGTTGAA AAGGTTCCAG ACTCCACATA TGACATGATT GGTGGTCTTG ACCAGCAAAT TAAGGAAATA AAGGAGGTCA TTGAGCTGCC AATCAAGCAT CCTGAATTGT TTGAGTCTCT TGGAATTGCG CAGCCAAAGG GTGTGTTGTT ATATGGTCCA CCTGGAACTG GGAAGACACT TTTGGCTCGG GCTGTTGCAC ATCACACTGA CTGTACTTTC ATCAGAGTTT CTGGTTCAGA GCTGGTCCAG AAATACATTG GAGAAGGTTC TAGGATGGTC AGAGAACTTT TTGTGATGGC AAGGGAGCAT GCACCATCAA TCATCTTCAT GGATGAAATC GATAGTATTG GGTCTGCTCG TATGGAATCT GGAAGTGGAA ATGGTGACAG TGAGGTGCAA AGGACTATGC TTGAGCTTCT CAATCAACTT GATGGATTCG AAGCGTCAAA CAAAATCAAG GTTTTGATGG CAACAAATCG TATTGATATT CTGGATCAAG CTCTTCTCAG GCCTGGAAGG ATTGATAGGA AAATTGAATT CCCTAATCCT AATGAAGAGT CACGTTTTGA TATCTTAAAG ATACACTCAA GGAAAATGAA TTTGATGCGT GGAATCGATC TGAAAAAGAT TGCAGAGAAG ATGAATGGTG CTTCAGGTGC TGAGCTGAAG GCTGTGTGCA CGGAGGCGGG AATGTTTGCG CTGCGGGAGA GGAGAGTTCA CGTGACACAA GAAGACTTTG AGATGGCGGT GGCGAAGGTA ATGAAGAAAG ACACAGAGAA GAACATGTCT CTGCGTAAGC TCTGGAAGTA GGAATCTCGT TGTTGTGTAA TTTC 
Length1304
Protein Sequence
Protein Residue
Map Locationscaffold_6: 8060608.. 8063556
Download Sequence
A.thaliana
AGI-codeAT5G19990.1
Descriptionregulatory particle triple-A ATPase 6A
TAIR curator summary26S proteasome AAA-ATPase subunit
Alias[ATSUG1][RPT6A][regulatory particle triple-A ATPase 6A]
Gene coexpression
MR
MR Locus Description
7.34847 Ahg483634 Translation elongation factor EFG/EF2 protein
10.583 Ahg950941 TUDOR-SN protein 2
14.3527 Ahg482666 glucan synthase-like 8
15.8745 Ahg311385 RNA-binding (RRM/RBD/RNP motifs) family protein
18 Ahg490940 Tetratricopeptide repeat (TPR)-like superfamily protein
18.3848 Ahg496493 histone deacetylase 6
21.0713 Ahg923482 Prolyl oligopeptidase family protein
23.4947 Ahg494964 protein arginine methyltransferase 4A
28.9828 Ahg489045 Tetratricopeptide repeat (TPR)-like superfamily protein
29.2916 Ahg935522 SIN3 associated polypeptide P18
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression