Detail



ID : Ahg951166

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|951166|scaffold_803053.1
Sequence
GGTAGAGAAT ACTAAAAGCA ATGGGAGATG GGAGTTCCAC TAGATCCAAC AGCTCAAACA GTAGTAGTGA GAAACCAGAG TGGCTGCAAC AGTACAATCT TGTTGGTAAG ATTGGTGAAG GCACTTATGG TCTTGTTTTC TTGGCTAAAA CCAAGACTCC GCCTAAAAGA CCAATTGCCA TCAAGAAGTT TAAGCAGTCA AAAGATGGAG ATGGAGTTTC CCCAACTGCT ATCCGCGAGA TTATGTTGCT TAGAGAGATT TCCCATGAGA ACGTCGTGAA GCTTGTGAAT GTCCACATCA ATTTTGCAGA CATGTCTCTG TATCTTGCCT TTGATTATGC TGAGTACGAT CTCTATGAAA TCATCAGGCA CCACAGAGAC AAAGTCGGCC ATTCGATAAA CACATACACA GTTAAGTCTT TGCTCTGGCA GCTTCTCAAC GGATTGAACT ATCTTCACAG TAATTGGATT ATACACAGAG ATTTGAAACC GTCGAATATC TTGGTTATGG GTGAAGGAGA AGAACACGGA ATAGTGAAAA TAGCTGATTT CGGGCTCGCA AGGATATATC AAGCTCCGTT GAAACCGCTA TCGGATAACG GAGTTGTGGT CACAATCTGG TACCGAGCAC CGGAGCTGCT TCTTGGCTCG AAGCACTACA CGAGCGCCGT CGATATGTGG GCGGTTGGAT GTATATTCGC GGAATTACTA ACTCTCAAAC CGTTGTTTCA AGGAGCAGAA GCGAAATCGT CTCAAAACCC TTTCCAATTA GATCAACTCG ACAAGATATT CAAGATCTTA GGCCACCCGA CGATGGATAA ATGGCCAACA CTAGTTAACC TTCCGCACTG GCAAGGCGAT ATTCAACACA TTCAAGCTCA CAAATACGAC AGCGTGGGAC TCCACAACGT GGTTCACCTG AATCAGAAAA GTCATGCGTA TGATCTGTTA TCCAAAATGC TGGAATACGA TCCGCTAAAG CGGATCACGG CTTCACAAGC ACTAGAACAC GAGTATTTCC GAGTGGATCC TCTCCCAGGA CGGAACGCAT TTGTAGCCAC CCAACCGATG GAGAAGAATG TGAGTTACCC AACCCGTCCA GTCGATACAA ACACGGATTT CGAAGGCACG ACGAGCATCA ATCCGCCTCA AGCGGTAGCA TCAGGAAACG TAGCAGGGAA CATGGCAGGG GCTCATGGAA TGGGCAATAG ATCGATGCCA AGACCAATGG TTGCACATAA CATGCAGAGG ATGCAACCTC AAGGCATGAT GGCTTATAAT TTTCCGGCGC AGGCGGGGCT GAACCCGAGT GTTCCACTGC AGCAGCAGCG CGGGATGGCT CAACCGCACC AGCAGCAACA GCTAAGAAGG AAAGATCCCG GAATGGGAAT GTCAGGTTAT GCACCTCCTA ACAAATCCAG ACGCCTCTAA TGATTATAAG GTAAAATCGG T 
Length1451
Protein Sequence
Protein Residue
Map Locationscaffold_8: 19786477.. 19787927
Download Sequence
A.thaliana
AGI-codeAT5G63610.1
Descriptioncyclin-dependent kinase E;1
TAIR curator summarysignificant sequence similarity to plant and animal cyclin-dependent protein kinases, and was classified as an E-type CDK with a SPTAIRE cyclin binding motif in the kinase domain.
Alias[ATCDK8][CDKE1][CDKE;1][HEN3][cyclin-dependent kinase E;1][HUA ENHANCER 3]
Gene coexpression
MR
MR Locus Description
2.44949 Ahg327182 KH domain-containing protein
3.74166 Ahg496629 splicing factor, putative
4.58258 Ahg947977 cytochrome B561-1
7.74597 Ahg484186 protein kinase 2B
8.12404 Ahg483451 RNA binding
16.8523 Ahg944345 NADPH-dependent thioredoxin reductase B
20.3961 Ahg482201 LEUNIG_homolog
20.5913 Ahg484624 Oxoglutarate/iron-dependent oxygenase
22.9783 Ahg470396
27.4773 Ahg487277
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression