Detail



ID : Ahg327182

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|327182|fgenesh1_pm.C_scaffold_6002402
Sequence
ATGGCGGAGG AAGAGGTTGT TGTTATCTAT ACGCCGCCTG TAGATCTCAA GCGAAAGCTC GACGAGCAAC ATGCCGGGTC GAATGGAGAT ATCGTCGATG ATAGCAATCC AGTATCTGAT TCTTCGCAGG CTAAGCGAGC GAAGCTCGAC GATGAAGCTC AAGATGGTTT AGATCATGGG AATACACAAG AAAATGGTTC TTCAATGGAG GTAAAAGAGG AAGAACAGCT TCAGGAACCC AAGTATGAGA ATCAAGATTC TGTACCACTT GTTGATGAAG TTCAAGATCC CATTCATGCC AATGAATCTG AAAATAACAC TTGTGATGTA GCTCATGCAG CAGATGATCA TGTTAAGCCT GAGGATAACC AACAGGGTTG TATTGAAAAT AATAATGTAG AAGAATGTAA GAATGTCAAT GGTGGTGAAC CTCAGAAGGA GGTTGGTGAC GAAAGTAAGG TATTGAATGA TGGCAATTCT CAGAAAGAAA TTAAGGAAGT GGATGGTGAA AATTCTCAGA AGGAGGTTGA TGATACACAG TCAACGACTC GCACCATAGA TGTCCCAAGT TCGAAGGTAG GTGTGCTGAT TGGTAAAGGT GGGGAGACTA TACGGTATCT TCAGTTTAAC TCTGGTGCCA AAATCCAAAT CTTGAGAGAT TCAGAAGCTG ATCCGAACTC TGCGTTAAGA CCAGTGGAGA TAATTGGAAC TGTTGCATGT ATTGAGAATG CGGAAAAGCT TATCAGTGCA GTCATAGCAG AGGCTGAAGC AGGAGGTTCA CCTGCCCTAG TTGCGAGGGG CCATCCTTCC ACTCATGCGA TAGGGATTCC AGAACAGATA GAGATTAAAG TTCCAAATGA TAAGGTTGGT CTGATTATTG GCCGAGGTGG GGAGACAATT AAGGATATGC AGACAAGATC CGGAGCACGC ATTCAGTTAA TACCACAACA TGCAGAAGGT GATGGATTGA AGGAGAGGAC TGTCCGTATA TCTGGAGATA AGATGCAGAT TGACATAGCA ACCGACATGA TAAAAGATGT TATGAACCAG AATGCAAGGC CATCACCCTA TTCCGGTGGT TATAATCAGC CTGCCTACCG ACCCCGAGGG CCAGGTGGTC CACCTCAATG GGGTTCACGA GGTCCTCATG CTCCCCACCC CTATGCTTAC CACCCCCGTG GACCATATTC ATCTCAAGGT TCACATTACA ATTCTCCCAG TTACGGTGGC TATCCTCCAC AGCATATGCC TCCTAGAGGT GGATATGGTC CTGGTTGGGA CCAAAGACCT CCATATTCTG GTCCGTATAA TTATTATGGT AGACAAGGAG CTCAAAGCTC TGGTCCATTT CCACCTCCTT CTGGCCATGT ACCCTCCCCT GCGTTGGGTG GTCCCCCTCC TTCGCAGGTA AGTTATGGTT ACGGACAGAG CCATGGCCCA GAGTATGGAA ATGCTGCTCC TTACTCCCAG ACTGGTTATC AGCAGACTTA TGGGCAGACG TATGAACAGC CTAAGTATGA AAATAATCCT CCAATGCAGC CACCTTATGG AGGTTCATAC CCACCAGCAG GTGGTGGTCA GCCAGGCTAT TCCCAAATGC AGCAACCTGG TGTTAGGCCT TATGGTATGC AACAAGGTCC TGTCCAGCAA GGGTATGGGC CTCCTCGCCC TGCAGCTTCT TCCGGGGATG TACCTTACGA AGGTGCAACT CCTGTAGCAA CACCATATGG CAGTACCAAC ATGGCTCCAC AACAACAACA ATATGGCTAC ACATCAAGTG GTGGCCCAGT GCAACAGCAA ACATACCCTT CTTATAGTTC TGCTCCACCA TCTGACGGTT ACAACAATGG TACACAAACA CCTGCAACTG GTCCACCTTA CCAGCAGCAA AGTGTTCAGC CAGCTTCTTC AACTCATGAC CAGACTGGTG CACAGCAGGC TGCAGCAGCT GGGTATGGTG GGCAAGTAGC TCCAACCGGT GGATACAGTT CATATCCAAC AACACAGCCT GCTTATGGAA GCCAAGCCGC TTATTCACAA GCAGCAGCTA CTCAAGTAGG ATATGAGCAA CAGCCTGCAA CTCAACCTGC AGGGTATGCG GCTGCTCCAG GGAGTGCACA AGTGAAAACC CAATCGCCAC TGTCCGCTTA TGCTCAGTAC GAAGCAAGCC AGGTTTACGC AGCTCCACGT TAA 
Length2193
Protein Sequence
Protein Residue
Map Locationscaffold_6: 18932645.. 18936888
Download Sequence
A.thaliana
AGI-codeAT4G10070.1
DescriptionKH domain-containing protein
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
2.44949 Ahg951166 cyclin-dependent kinase E;1
3.16228 Ahg496447 proline-rich family protein
4 Ahg494092 Cysteinyl-tRNA synthetase, class Ia family protein
5.19615 Ahg943823 HEAT repeat ;HECT-domain (ubiquitin-transferase)
5.74456 Ahg904230 varicose-related
6.48074 Ahg947537 crooked neck protein, putative / cell cycle protein, putative
7.2111 Ahg315447 ILITYHIA
7.48331 Ahg483691 WD-40 repeat family protein / beige-related
8.83176 Ahg470941 Presenilin-1
8.83176 Ahg922878 SEUSS transcriptional co-regulator
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression