Detail



ID : Ahg951469

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|951469|scaffold_803356.1
Sequence
ACAGTTAATC ACGATTCGCC ATGAGAGCTC TTGAATCCAG ATTCTTCTTC TTCTTCATCT TCTTCTCAGT TTCCGTTAGT AGTGAACTTC ATCGGAGAAT CCTTCATCAG CCGCTTTTCC CGGAAACTTC TACTCCTCCA CCACCAGATT TCGAATCAAC GCCGTCTCCC CCTATACCAA ACACTCCCGA TCAGCCATTT TTCCCGGAGA ATCCTTCTAC GCCTCAACAA ACTCAGTATC CTCCTCCGCC ACCTCCTGTT TCCGCCGACG TCAATGGCGG ATTACCGATT CCAACAGCTA CCACTCAATC AGCGAAGCCT GGGAAAAAAG TTGCAATCGT CATTTCTGTT GGAATTGTCA CGCTTGGGAT GCTTTCTGCT TTAGCTTTCT TCTTGTATCG TCATAAAGCC AAGCACGCGA GCGATACTCA GAAGCTTGTT AGTGGAGGTG GCGATGGCGG CGGTTCTCGA AGATTCCAGG AAGATCCAGG ACCACCGACG ACGACGTCGT CTACATTTCT CTACATGGGA ACTGTTGAAC CGAGCCGTGT ATCGGCCAGT GAGTCTAACG GCGGAACTAA TGGACCGGTT AATTCGTCTC CGTACCGGAA ATTGAATTCC GCTAAGAGAT CGGAACGGTA TAGGCCGAGT CCGGAGCTTC AACCGCTTCC TCCGTTAGCT AAACCGCCGC AACCGTCTGA TAACTCTCCG TCGGCTTTAT CTCCTTCTTC ATCATCTTCC GGTGAAGAAT GCCGTGACAC GGCGTTTTAC ACGCCGCATG GATCTGCGAT CAGCAGCGAT GACGGTTACT ACACGGCATT TCCTCGCTCC GCCAAATCAC TTCCTCACTC GAAGAGAACA TCTCCGAGGT CTAAGTTTGG ATCAGCTCCT GCGACGGCAG CATCTAGGTC GCCGGAGATG AAACACGTCA TCATCCCGTC AATAAAGCAG AAACTGCCGC CACCAGTACA ACCTCCGCCT CTAAGGGGCT TGGAAAGTGA TGAACAAGAG CTTCCTTATT CCCAGAACAA GCCTAAGTTC TCGCAGCCAC CTCCACCGCC GAACAGGGCG GCGTTTCAAG CAATAACTCA GGATAGATCA CCAGTGCCTC AACCACGGCG GTCTCCACCT CCAGTCCAGA CTCCACCACC ACCACCTCCT CCTCCGCCTC TTGCTCCGCC TCCACCTCCT CAGAAACGGC CGAGAGATTC CCAACTGCTA CGAAAAGTCA CCAATTCGGA AGCAACAACC AATTCCACAA CGTCACCTTC AAGAAAACAA GCATTCAAGA CTCCAAGTCC TAAATCGAAG GCTGTCGAAG AGGTCAATAG CGTATCAGCA GGTTCTCTTA AGGAAACAGA TGATGGGGAC ACGGACCCAA GCAAGCCAAA GTTAAAGCCA CTCCACTGGG ACAAAGTACG AGCGAGCTCA GATCGAGCCA CTGTTTGGGA CCAACTCAAA TCAAGCTCAT TCCAATTGAA CGAGGATAGG ATGGAGCATC TGTTTGGTTG CAATTCTGGA AGTTCAGCTC CAAAGGAACC TGTGAGAAGG TCAATGATGC CTCCTGCTGA GAATGAGAAC AGAGTGCTGG ATCCAAAGAA ATCGCAGAAC ATTGCAATTC TCTTAAGAGC TCTCAATGTA ACACGTGAAG AAGTCTCTGA AGCTCTCACG GATGGTAATC CCGAGAGCTT AGGTGCTGAG CTTTTAGAGA CTTTGGTGAA GATGGCTCCA ACAAAGGAGG AAGAGATCAA ACTCCGAGAG TACTCTGGTG AAGTCTCGAA ACTAGGGACA GCTGAAAGAT TCCTTAAAAC CATTCTTGAT ATCCCTTTTG CCTTTAAAAG AGTTGAAGCA ATGTTGTATA GAGCCAACTT TGATGCAGAA GTCAAATATC TAAGGAACTC TTTCCAGACA TTAGAGGAAG CAAGCTTAGA ACTAAAAGCA AGCAGACTAT TCCTAAAGCT CCTTGAGGCT GTCTTAATGA CTGGAAACCG AATGAACGTT GGCACGAATC GGGGAGATGC CAAAGCCTTC AAACTCGATA CGCTTTTAAA ACTTGTAGAC ATCAAAGGAG TTGATGGCAA AACCACATTG CTTCATTTTG TCGTCCAAGA AATCACAAGA ACTGAGGGAA CAACAACAAC AAAAGACGAA ACCATCCTCC ATGGAAACAA TGACGGTTTC AGAAAGCAAG GATTACAAGT AGTTGCTGGA CTCAGTAGAG ATCTGGTTAA TGTGAAAAAA TCAGCCGGAA TGGATTTCGA TGTACTGAGC AGTTACGTGA CAAAGCTCGA AATGGGTCTT GATAAACTCC GATCATTTCT CAAGACAGAG ACAACTCAAG GGAAGTTCTT TGATTCGATG GAAACGTTTC TCAAAGAAGC AGAGGAAGAG ATCCGAAAGA TCAAAGGAGG AGAAAGAAAA GCTTTGTCAA TGGTCAAAGA AGTAACAGAG TATTTCCATG GAAACGCTGC GAGAGAAGAA GCACATCCTT TAAGAATCTT CATGGTCGTG AGAGATTTTC TCGGAGTTCT CGATAATGTT TGTAAAGAAG TGAAGACGAT GCAAGAAATG TCGACGTCCA TGGGTTCAGC TTCAGCTAGA TCGTTCAGGA TTTCAGCAAC AGCTTCATTA CCGGTTCTTC ATAGGTATAA AGCAAAACAA GACGACACAA GCTCGGATAG TGAACACAGC AGCAACTCTT CTACGTGATT GAAACAAAAA GCTGTACAG 
Length2729
Protein Sequence
Protein Residue
Map Locationscaffold_8: 20918045.. 20921443
Download Sequence
A.thaliana
AGI-codeAT5G67470.1
Descriptionformin homolog 6
TAIR curator summary
Alias[ATFH6][FH6][ARABIDOPSIS FORMIN HOMOLOG 6][formin homolog 6]
Gene coexpression
MR
MR Locus Description
3.31662 Ahg949805 MATE efflux family protein
8.7178 Ahg470104 Acyl-CoA thioesterase family protein
17.4929 Ahg492821 JUMONJI 14
24.8193 Ahg313369 phosphoenolpyruvate carboxylase 4
34.0147 Ahg493859 Restriction endonuclease, type II-like superfamily protein
34.322 Ahg488154 Auxin-responsive GH3 family protein
34.4964 Ahg322665 spiral1
36.1109 Ahg496995 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein
36.3318 Ahg482233 DCD (Development and Cell Death) domain protein
39.9124 Ahg490346 RELA/SPOT homolog 1
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression