Detail



ID : Ahg951862

Blast(Query) A.halleri   /   A.thaliana (NOT RECIPROCAL)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|951862|scaffold_22200002.1
Sequence
TAACAATCCT CCTCATTTGG GCAATTCTCC AACCTTCAAA GCCACGTTTC CTCCTCCAAG ACGCCACCGT CTACGCCTTC AACGTCTCCG GCAATCCACC GAACCTCCTC ACCTCCAACT TCCAAATCAC TCTTTCTTCC CGTAACCCTA ATGACAAGAT CGGCGTTTAC TACGACCGCC TTGAAGTCTA CGCTACCTAC CGGAGGACAC AAAGAAATCA ACATCTGGTC GCCGTTTGTC TACGGAACCT CCGTTCCCAT CGCTCCTTTT AACGGCGTTG GTCTTGACGA AGATAAAGAT AACGGCGCCG TTATGTTGAT CATTCGTGCT GATGGTAGAG TTCGGTGGAA GGTTGGGACT TTTATCACCG GGAAGTATCA TCTTCATGTG AAGTGTCCGG CGTATATTAA CTTCGGTAAT AAAGCTGCCG GAGTTATCAT CGGAGATAAC GCCGTTAAGT ATACGCTTAC CACTAGTTGT AGTGTTAGTG TGTGAAACGG CGACGGTGAA AAATA 
Length515
Protein Sequence
Protein Residue
Map Locationscaffold_222: 4919.. 5477
Download Sequence
A.thaliana
AGI-codeAT3G11660.1
DescriptionNDR1/HIN1-like 1
TAIR curator summaryencodes a protein whose sequence is similar to tobacco hairpin-induced gene (HIN1) and Arabidopsis non-race specific disease resistance gene (NDR1). Expression of this gene is induced by cucumber mosaic virus. Localization of the gene product is similar to that of NHL3 (plasma membrane) but it is yet inconclusive.
Alias[NHL1][NDR1/HIN1-like 1]
Gene coexpression
MR
MR Locus Description
23.3666 Ahg899747
23.5584 Virus3627
24.6577 Virus1001
45.4973 Virus1086
56.745 Ahg924066
57.2713 Ahg331392 Beta-glucosidase, GBA2 type family protein
71.6798 Ahg923290 RAB GTPase homolog G3E
90.7965 Ahg481314 FAD-dependent oxidoreductase family protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression