Detail



ID : Virus2930

     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
DescriptionBasella_rugose_mosaic_virus|plants|ssRNA
Sequence
AAATTAAAAC AACTCAATAC AGCATATGAA AAGACGATCA AGCAATCAAG CAATCAACAG CGATTCAAGC ATTCTTGCTC ATTTTCTAGC AAACAATTTA TAAACAGTTC TTTGACAACA AGTAGACTTA CGAGTTTTCG GAAGCAAATT TCATATTTTC GAATTTTATT CTTAAACCAA AACAATCAAA TGGCATCAGT TGTGTTTTTC GGAACCATCC CTAGCACTCT TGTGCTCCCT GTGAACAAGG CAACTAATCA TGTCAAGTGC GCAATCGCAC CAGCTGTTGT CGCACCACCA GCTTTACACA AAATCAGCAC AAATAAAGCT TACACGGCAG CTAGCCGTGT TATGATGGAA TCATATGATC GTGCTCAGAA AGCATTTGAG GCACGACTTG ATAAACTACT TGAAGCTAAG AGAGAAGCTG CACCACTGAG TAGAATCGTT AAATTTAAGG GTGGCTACAG AATTCGCTGG GCAAGCGCCA AGCGAGTAGC TGAAGTGAAG ACACACAACC AAAGGAAGGC TGAAATGATT GAGAAGTTTA TGAACAGCCC TGACAAAATT TTATACAAGA TCGAAGCAAA TATTGAGGAG TCCGAGCGGT TCAATGGGCA AGTTTCGCTT AAAAGCCCAC ACTGGAAGCG GACGGTCTCA GATAGACAGA TTAAGAATCC GCCAAAGATA AGGACAACTA ACGTTAAAAA TCTGTTGTCT CAAACATTCA GGGCTGTGAC ACAAAATGGA GCAATAGTTG AAATAATAGG CAAGAAGAGG AAAAGAGCAA TCCGTTGCTC TTACAAGACA GTGAAGAAAT CAATTATACC ATGTTTTGAC TTGCCACACA AACATGGCAT CTGGAGCAAA AGGGAGCTAG TTCCTTCTGA GGTGAAGGAA TTAGTCGATA TAGTTGTCAA GTACAGGCGT CTGAGAGATG TTTTTACAGA TAATGATATT CAACCTGGCT GGAGTGGGTT TGTTGTTCCA CGTAAAGTTG CAACATCTTA CTGGAGGAAG TATGATGAAG TAATTGTTCG TGGTAGATTA TATGGGAAGG TAGAAGATGC TAGAACAAAA CTCCCATTCG GAGATGTTTC ACGCATTCAT CATTATAGCA ACGAGCGACT TTTTTTTGAA GGATGGCAGG AAAACTTTAA GAAGTTAGCT CCAGTTCAAC AGGATCATGT CTGCAGGATA ATGAAAGACA ACAGATTTGC TGGGAAGCTT GCAGCAACAA TCGCACAGAT CCCCTTCCCT TGTCATAAAC TTACTTGCGA TTTGTGTAGA AAGGTCTACA ACCCAATAAG TGAGGATGCA TACAAAGAGC TTGTGAACAA TCATGTAGAG AGCAGGGCAA GCGAAATCAG TGAAGCTCTA GAACACTATC CTGAATTAAA GCAGGTTGTT GCAAGGTTTA GGGATGAAAC TCTAGTGGAA AGATCACTAG ATTCATTGAT TGATATTCGT AAATTGACAC TGGGACATAG GGCAACCCAA ATGCAACAGA TCCAAAGGAT GTCTGATATC CTAATGAAAG GACTAACCAT GACTGAAAAT GATGTGGAGG AGGTTGGTAA GAATTTACTG GAGATTACAC GCTGGTTTGC AAATCACTTG AGCTTGATTG ATAGAGGATC TCTCCGAACC TTCAGGAACA AGAGATCTTC AAAAGCAATG TTGAATCCTT CATTATTATG TGATAACCAG CGTGATACAA ATGGCAATTT CATATGGGGT CAGCGAAGTT ACCATGCAAG ACGCTTCTTC AGTAACTTCC TTGAGGAGAT TGACCCAACT AAAGGCTATG AAAGATACAT TATCAGAAAG TGCCCGAATG GAGAAAGAAA ATTGGCAATC GGCAATTTGA TAGTCAATCT TGATTCTGAG AAGACTAGAG AGGCACTTCG AGGTGAAGAG ATAGAGAGCG AGCCCCTGAC TGAAGCATGT GTTAGTAGGA GAAACGGGAA TTTCATATAC CCGTGCTGTT GCGTTACTGA AGATGATGGG AGACCATTAT ACTCACATTT GAAGAGCCCC ACAAAAAGGC ATTTGATGAT AGGGGCATCT GGTGATCCAA AGATACTCGA TATGCCGTCA GCGGAACTTG ACAAGATGTA CATAGCTAAG CAAGGATATT GTTATTTGAA CATTTTCCTA GCGATGCTTG TGAATGTTAG TGAGGAAGAA GCTAAATTCT TCACGAAGAT GGTACGAGAT GTTTTAATAC CAAAACTTGG TGAATGGCCG ACAATGCATG ATGTAGCCAC AGCTTGCTAC ATAGCTACAA TTTTCTACCC AGATGTGAGT AACGCTGAGT TACCAAGAAT ATTAGTGGAC CACGCTCAGA AGACAATGCA TGTTATTGAC TCGTTCGGTT CACTTAGCAC AGGGTACCAC GTCCTAAAAG CTGGCACTGT CTCCCAGCTG ATCGATTTTG CGTCTAATGA TCTGGACAGT GAAATGAAGT TTTACAAAGT TGGTGGAAAC AATCTTCCTG AATCTGAAAG GATGATCACA ACATTGATCA AAGGGATATA TAGACCAAAG CTGTTGGTCA AACTGATTGA GGATGATCCA TATGTGCTAA TGATGGCATT ATGCTCTCCA AAGCTCTTAA TCAGCCTGTA CAACAATGGT TCTCTAGAGT TGGCAACCCA GACATGGATT AAGAAAGATA AGGATGTTTC ACTGATATTT ATGCAGTTGT CTGATCTTGC TAAGGAAATG TCAAAAGCTG ATCTTTTAAT TGAACAACTG AAGCTGATGA GTGAGAGTGC AAGTAGAATA CGTGAGCTTT TACCAGTGCC AATTATCGCT GATAAGTCGC GCATTATATT TAATGAAATG CTCACTCTGA AATCCTCAAT CTTTGAAGCT GATGAGGAGC TTAGTAGAGC TGGTTTCGCC AATTACCAGA CGCGCCTCTA CGAAGCAATG GAAAAAATGT ACCAGCAACA ATTAGAACAG GAGTGGCGAG ATTTAGGCTG GTTTGGAAAA TTATCTTTAA TCATTTTCTC ACAGAGGCAC AGACCAAGAT CTACTCCTGC ACTGCCCCTC ACAAGGTTAA AAGGTTTAGA AGACAAATTC GCTATATCAG CTACTTGGTG TGCTGGCAAG ATAAAGGGAC ACCTCAACAC AGTGCGTGTG TGCGGGGTGA ATAAATTCAA ACAAACAGTT GGCTTTGTAA ATAGAGTTTT AATTGACAAG TCAGTGTACA TATTAACTAG ATGTATGCAA GATGTGTTTT ATTTCATTAA TGTAGCAGTA GTTGCACAGA TATTAATTTC AACTGTATAT ATGATTAATA GATGGTTGCA TCAGCAGAAA GTAGCACAGA TGGAATTAGA GTATTATAAG TATAAAAATA GTGAAGCCAA AATAACAATG CTTTTCAATA ATTACCAGAA AATTCATGGG AATGCTCCAA CAAGAGCTGA GTTCATTGAG TTTCTTCGAG AAAATGATGA TAAGTTGTGT GACTACATAA CTATAGACCA TGAGGTTGCA CACCAGTCAA AGAATCCGTT TGAGAGAAAT CTTGAAAAAG TGGTTGCAAT GATGGCACTA TTCGCAATGG TGTTTGGAAG TGACAAGAGC TCAGCTGTTT TTAACGTTCT TCGGAATATT AAAACAGTTT TTGGTACATT GGAAGATGGT GTTCGTTATC AATCACTTGA TGAAATTGAA TCACTTGAAG ATGAGAAGAA ACTTACAATT GATTTTGAAC TCGATACAGA ACAGTGCTAT GAGGGAGCAA CAATGGATGT CCAGTTCAAT CAATGGTGGA ACAAGCAATT AGAGCAGAAT CGTGTCGTTC CACATTATAG AACAGGAGGA TGCTTTGTGG AGTTTACTCG AGCTACATCA GCGAGTGTAT GCAACACAAT TGCATTAAGT GAAGAAAAGG AATTTCTGGT TAGAGGAGCG GTAGGATCAG GAAAGTCGAC AGGATTGCCC TCCACTCTGA GTAGGAAAGG AAAAGTGCTG CTTCTTGAGA CAACAAGACC GTTGGCTGAA AATGTGTGCA AGCAGCTTAG AAAGGAACCC TTCAATCTTG CGCCAACCTT GCGCATGCGA GGGGTGACCT CGTTTGGTTC CAGCAACATC ACCATTATGA CAAGTGGCTT TGCACTTCAT TACCATGCCA ATAATGCAAG TAAGCTCAAA GACTTTGATT ACATAATCAT TGATGAATGT CATACACTTG ATGCTTCAAC CATGGCCTTC TATTGTCTAC TTAAAGAGTA TGATTTCCAA GGGAAAATAC TGAAGGTTTC AGCAACACCA CCAGGAGAGG AATGCGAGTT TAAGCCACAA CATGATGTGC AACTTAAAAT TGAGCCAGAA CTCTCATTTC ATGCTTTTGT AGCAGCACAA GGCTCAGGTT CAAACGCAGA CGTTGTGCAG CATGGAAATA ATATCCTTGT ATATGTGGCC AGTTACAATG ACGTCGATCA ATTAAGCAAA CTTCTCATTG AAAAAGGACA CCATGTCACA AAGGTTGATG GGCGAACAAT GAAGCTTGGG AGTGTTGAAA TCCCAACAAA AGGTAGCGAT GCGAAGAAAC ACTTTGTCGT CGCCACTAAC ATAATCGAGA ATGGAGTGAC GCTTGATATT GACGTGGTAG TCGATTTCGG AATAAAGGTT GTTGCTGAGC TTGATGCTGA CTCTCGCTGT ATGCAATACA AGAAAGTTTC AATAAATTAT GGCGAGAGAC TACAAAGACT GGGGAGAGTT GGAAGAGTTA AGCCAGGCTA TGCACTTAGA ATAGGGCATA CTGAAGTTGG GTTGACATCC ATTCCAATAT CTGTTGCCAC TGAAGCTGCC TTCCTATGTT TTGCCTATGG GCTGCCTGTA ATGACACATA ATGTAACAGC TAGTTTGCTT GGAAAGTGCA CAACAAAGCA GGCACGCGCT ATGATGCATT ATGAGCTACC ACCTTTCTTC ATGGTTGAAC TCGTGATGTA TAATGGGACA GTGCATCCAC AGATTGAAAA ACTACTGCAA GGGTATAAGC TTCGTGATTC CACAATGCAT TTGAGCACGT TAGCTATTCC AAACAGTGGA GTATCAAGGT GGAAAACAGT TAGAGAATAC AAGCAACTTG GAATCCATAT TGAAGCTAAC GATGATGTAC GCATTCCATT CGCTTCAAGA AACATACCAG ATAAGCTGTA TACAGAGATT TGGAAAGCGG TCCAGCAGCA CAAAGCAGAT GCAGGCTTTG GAAGACTTAA GAGCACGTGT GCCAGCAGCG TTTCGTATAC ACTGTCAACG CAGCCACATG CAATACCAAG AACAATTGCG ATAATAGATC ACTTGCTTGC TGAGGAAAGG CAGAAGAAAG AATGCTTCGA ATCGCTCAAT GACACTCTAT GCTCAACGAA CTTCACACTG GTAGGCATTG TCAACAAAAT ACGGAATCGC TACTTGCGTG ATCATTCAAC GCATAACATA GCAGTTTTAC AAGCTGCCAA GGCCCAACTA CTTGAGTTCA ATTCAAAGGA GATTGACCCA GAACGTCTTG AAGATCTCAT GGGGTATGGG CTTCTAGATA CAGTGCAATA CCAAGACAAG AAGAGCATGA GGAAATGCCT GAAACTGGAA GGACAATGGG ATAAGCATTT GATGTCGAAT GATGTTGTAG TGGCTGGTTG TGTTTTGGTT GGTGGTGGTT GGATGATATG GGAATTTTAC AAACAGAGCC AAGAGATGGT TGAATTTCAA GGAAAGAAGC GTAAGATCCA GAAACTGAGA TTTAGAGATG CTCGAGACAG AAAGATGGGC CGAGAAGTGT ATGGTGATGA TGGCACAATT GAGCACTATT TTGGAGCAGC ATATACAGAA AAAGGAAAGA AAAAGGGAAA TAACAACACA AAGGGTCTAG GTAGGAAAAA TAGGAGATTT GTACATATGT ATGGATTTGA CCCAACTGAA TACTCTTTTG TTAGATTTGT AGATCCACTA ACAGGACATG CTCAAGATGA GGGAATAACA GCAGACATGT CTATAATTCA AGAAGAAATA GCTGACATTA GGGAGAAGGC TATGCTAAAT GATGATGATC TTATAGATTA CATTAGACAA AATCCAGGCA TACAGGCGTA CTACATGAAG CACGGCTCAG ATAAGGCATT GCGTGTCGAT TTGACACCTC ATAACCCATT GCTGGTGTGT CGGTCTGCGA CGATTGCAGG CTATCCTGAA CGTGAAATTG AGCTGCGACA AACTGGCCCT CCAAAAGTTG TTAATGTGAA TGAGGTGCCA AAGGTAGAAA AGGATCAAGT GGCTTCAGAG GGGAAATCAA TCGTTAGTGG CTTGCGGAAT TACAATCCAA TTCCCTCAAT AGTGTGTCAG TTAACAAACT CATCAGGAAG TGATCATCAG ACATTGTTTG GGATTGGCTA TGGCCCACTT ATCATAACGA ATGGTCATCT GTTTCGAAAT AATAATGGCA CATTGCTCAT TCGATCCCAC CATGGAGAGT TCACGATTAA AAACACGACA CAGCTAAATA TCCACCATGT TGCAGCAAAA GACATGATTT TGATCAAAAT GCCAAAGGAT TTCCCGCCGT TTCCCCAACG CATACATTTT CGAGGTCCAA AAGCTGATGA AAAAGCTTGC TTGGTTGGTT CGCGATTCCA AGAAAGACAC ATTTCGAGTG AGGTGTCTGA TTCAACAATT GTGCGACCGA CAAGTCCAGG TGGTTTCTGG AAGCATTGGG TTTCAACTAA AGATGGAGAC TGTGGGTTAC CACTTGTATC TTTGAGAGAT GGCAAAATCA TTGGGTTCCA TAGCCTGACA AGTACAAAGA CTGACATTAA TTATTTTGTT CCTTTCACTG ACAATTTTGA AGAAGAAGTA CTTGGGAAAC TCGACTCGAT CACATGGGTC AAGCATTGGC GGCACTCATC AGATAAGATT GCTTGGAATG GTTTGTCGTT GAAGGAAGAT TATCCATCCA GAGAGTTCTC AGTTTCGAAA ATAATATCTG ATTTGAATGG ACTTTTCATG GATGAGGTTT CTGAGCAGAG CAAATATGAG AAGTGGGTGT TGCAGAGATT AGAAGGGAAT TTGAAGGCCG TTGGGCAGTC GACTAGCCAA CTTGTAACAA AGCATGTGGT CAAGGGCCCT TGTGTTTTAT TTCAAGAATA CTGTGGCGAG CGTCCTGACG CTCTCAACTT TTTCAAGCCT TTCATGGGTG AATATGGACC AAGTAAGCTA AACAAGGAAG CTTTTCTTAA AGATTTTCTA AAATATGCTG GTCCGATAAC AATTGGAGAA GTTGATACAG AAAGATTTGA AAGGGCTGTG CTAAATGTGA TAAAGCTGTT TGAAGATTTG GATTTTGGAG AGTGTGCATA TGTTACAGAT CCCGACGCAA TTTATGATTC TTTGAATTTA AAAGCGGCAG TTGGGGCCTT GTATCAAGGG AAGAAGAAGG AGTATTTTGA GATGATGAGC ACATTCGAGA AGGAAGAATT GTTACGGCTC AGCTGCCTAC GGCTTTTTAA AGGTGAAATG GGCGTTTGGA ACGGCTCTTT AAAAGCAGAA CTTAGAGCCA AAGAGAAGTT GGAACAGAAC AAGACACGCA CTTTCACTGC AGCTCCAATT GATACATTAC TTGGCGGGAA GGTATGTGTT GATGACTTTA ATAACAGATT CTATTCACTA AATCTTGAGG CACCGTGGTC GGTTGGCATG ACAAAGGTCT ATGGTGGATG GAATAAGCTG TTAAGTAAAC TGCCAGAGGG GTGGATTTAT TGTGATGCTG ATGGTTCACA GTTTGATAGT TCGTTAACCC CATACTTGAT CAATTCAGTT GTACAAATCA GAGAGCACTT CATGGAACCA TGGGATGTTG GTGTTAGGAT GTTACGGAAT TTTTACACAG AAATCATTTA CACACCAATT CTAGCACCAG ATGGTACAAT AGTAAAGAAA TTCAAAGGGA ACAATAGTGG TCAGCCATCA ACTGTTGTAG ATAACACTAT AATGGTTGTT CTGGCAATGC ATTACTCTAT GGAGAGAGAG AACTGGAGTG AAATAGAACG GAAGAGTGAC ATCGTTTTCT TTGCCAACGG GGATGATCTT ATTATAGCGA TTAAACCAGA GAAGGAAAAG TTTCTTGACA ATTTGCAGTC AAACTTTCTA GAACTGGGCT TGAAATATGA TTTTTCCAAC AGGCACAGGG ATGTGAGGGA TCTCTGGTTC ATGTCACACA GAGGGATTGA GTACCAAGGC ATATTAATAC CAAAGCTCGA AGAAGAGAGA ATAGTCTCAA TTCTGGAATG GGACAGGAGC ACTGAAATAT CACACCGGGC TGAGGCAATT TGTGCAGCAA TGATAGAAGC ATGGGGTTAC CCAGATATGC TCAGACATAT TAGGGAGTTT TACTTGTGGC TCATGCAACA CCCATGGTAC AAGGATCTTG TTAAGGAAGG AAGGTTGCCA TACATCTCAG AATCAGCTCT TAAAAAGTTG TACACTGATG AGGAAATCAA TGAGCATGAA CTGGCAGAAT ACTGGCGAGC ATTAGTGATC AATGACAATG AGCAAGAGGA TGAAGTCGTA TATCAATCGG GTAGCGGTCC AGCTACACCA AGTTCCCAAC GCCAACAAGC TCCCCAAGGG CAAGAAGGCA GTATTGATGC AGGTCGAAAT CAACAAGCTC AGAGGCCACA GCCTTCAAGC GATGTCGTCA GACATGATGG GAGCCAAGCA CAAGATGTTG GACAAGTAAG TTACACTATT CCTAGACTCA AGAATATTTC AAAAATGCGT CTGCCAAAGG TGAAAGGAAA AATCATTCTC TCCCTTGACC ACATTATAGA TTACAAACCA GATCAACTTG ATCTCTCAAA CACGAGAGCA ACACATGAAC AGTTGCAAGT CTGGTACAAT GCGATCATGA ATGAATATGA GGTCAGTGAA TCACAGATGG GAGTTCTATT GAATGGCCTG ATGGTTTGGT GTATTGAGAA TGGCACCTCA CCAAATTTGA ATGGTGAGTG GGTGATGATG GATGGTGAGG AACAAGTCAC ATACCCACTA AAACCAATAA TTGAGAACGC TAAGCCATCA TTTCGACAAA TCATGCATCA CTTCTCAGAT GCGGCTGAAG CGTATATTGA AATGAGAAAT AGAGAGAAGC CATACATGCC TCGGTATGGC TTGATCAGAA ATTTGAGGGA CATGTCGCTA GCCAGGTATG CCTTTGACTT CTATGAGATT AATTCGCGCA CTCCAGCGCG TGCTCGTGAA GCGATTGTGC AAATGAAAGC GGCTGCCCTT ACAAATGTTT CCAACAAACT ATTTGGTTTG GATGGGAACG TCACCACTAC AACGGAAGAC ACTGAGAGGC ACACGGCTTC TGACGTTAAT GCTCGTATGC ATCATCTTAT GGGTGTGACG CAGGGCTAAC TATCAAAATA GTTACTGCAT TATTATATTT ACTTATGTCT AGTTTTACAT TTAATATTTT ACTACGTCTT GTTATAGATT AGTAGATCCT AGCTTCGCAT ACATTCCAAG AAGAGCCAGG GTGGACTTTC CACGAGAGCA TTTGGTTGGA TGCGCGACTA GTTAAGTTAT TTTACCTTTG TTTGTATTAA TGCAGCGTGT TTATTCAGTA GTTGTAACCT AGCCTATCAC TGTTAATTTG GCATGTCGGA GTGGGCTTCC CACGTGTGCA TTTCAAGTTA CTCATTGAAG GTGGAAAACG AAAGCACTCT AACTCACATG GGTCACTAAG GGTGGCTAGG CCACGTGTGG ACTGTGCGTT TTAGATACAG CTTT 
Length9804
Protein Sequence
Protein Residue
A.thaliana
AGI-code
Description
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
1.41421 Virus2917
1.73205 Virus3106
2 Virus3821
3 Virus3578
3.16228 Virus2947
4 Virus3489
4 Virus3865
5.47723 Virus3714
5.65685 Ahg492675 Protein of unknown function, DUF584
5.83095 Virus3415
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression