Detail



ID : Virus3821

     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
DescriptionTobacco_etch_virus|plants|ssRNA
Sequence
AAATAACAAA TCTCAACACA ACATATACAA AACAAACGAA TCTCAAGCAA TCAAGCATTC TACTTCTATT GCAGCAATTT AAATCATTTC TTTTAAAGCA AAAGCAATTT TCTGAAAATT TTCACCATTT ACGAACGATA GCAATGGCAC TCATCTTTGG CACAGTCAAC GCTAACATCC TGAAGGAAGT GTTCGGTGGA GCTCGTATGG CTTGCGTTAC CAGCGCACAT ATGGCTGGAG CGAATGGAAG CATTTTGAAG AAGGCAGAAG AGACCTCTCG TGCAATCATG CACAAACCAG TGATCTTCGG AGAAGACTAC ATTACCGAGG CAGACTTGCC TTACACACCA CTCCATTTAG AGGTCGATGC TGAAATGGAG CGGATGTATT ATCTTGGTCG TCGCGCGCTC ACCCATGGCA AGAGACGCAA AGTTTCTGTG AATAACAAGA GGAACAGGAG AAGGAAAGTG GCCAAAACGT ACGTGGGGCG TGATTCCATT GTTGAGAAGA TTGTAGTGCC CCACACCGAG AGAAAGGTTG ATACCACAGC AGCAGTGGAA GACATTTGCA ATGAAGCTAC CACTCAACTT GTGCATAATA GTATGCCAAA GCGTAAGAAG CAGAAAAACT TCTTGCCCGC CACTTCACTA AGTAACGTGT ATGCCCAAAC TTGGAGCATA GTGCGCAAAC GCCATATGCA GGTGGAGATC ATTAGCAAGA AGAGCGTCCG AGCGAGGGTC AAGAGATTTG AGGGCTCGGT GCAATTGTTC GCAAGTGTGC GTCACATGTA TGGCGAGAGG AAAAGGGTGG ACTTACGTAT TGACAACTGG CAGCAAGAGA CACTTCTAGA CCTTGCTAAA AGATTTAAGA ATGAGAGAGT GGATCAATCG AAGCTCACTT TTGGTTCAAG TGGCCTAGTT TTGAGGCAAG GCTCGTACGG ACCTGCGCAT TGGTATCGAC ATGGTATGTT CATTGTACGC GGTCGGTCGG ATGGGATGTT GGTGGATGCT CGTGCGAAGG TAACGTTCGC TGTTTGTCAC TCAATGACAC ATTATAGCGA CAAATCAATC TCTGAGGCAT TCTTCATACC ATACTCTAAG AAATTCTTGG AGTTGAGACC AGATGGAATC TCCCATGAGT GTACAAGAGG AGTATCAGTT GAGCGGTGCG GTGAGGTGGC TGCAATCCTG ACACAAGCAC TTTCACCGTG TGGTAAGATC ACATGCAAAC GTTGCATGGT TGAAACACCT GACATTGTTG AGGGTGAGTC GGGAGAAAGT GTCACCAACC AAGGTAAGCT CCTAGCAATG CTGAAAGAAC AGTATCCAGA TTTCCCAATG GCCGAGAAAC TACTCACAAG GTTTTTGCAA CAGAAATCAC TAGTAAATAC AAATTTGACA GCCTGCGTGA GCGTCAAACA ACTCATTGGT GACCGCAAAC AAGCTCCATT CACACACGTA CTGGCTGTCA GCGAAATTCT GTTTAAAGGC AATAAACTAA CAGGGGCTGA TCTCGAAGAG GCAAGCACAC ATATGCTTGA AATAGCAAGG TTCTTGAACA ATCGCACTGA AAATATGCGC ATTGGCCACC TTGGTTCTTT CAGAAATAAA ATCTCATCGA AGGCCCATGT GAATAACGCA CTCATGTGTG ATAATCAACT TGATCAGAAT GGGAATTTTA TTTGGGGACT AAGGGGTGCA CACGCAAAGA GGTTTCTTAA AGGATTTTTC ACTGAGATTG ACCCAAATGA AGGATACGAT AAGTATGTTA TCAGGAAACA TATCAGGGGT AGCAGAAAGC TAGCAATTGG CAATTTGATA ATGTCAACTG ACTTCCAGAC GCTCAGGCAA CAAATTCAAG GCGAAACTAT TGAGCGTAAA GAAATTGGGA ATCACTGCAT TTCAATGCGG AATGGTAATT ACGTGTACCC ATGTTGTTGT GTTACTCTTG AAGATGGTAA GGCTCAATAT TCGGATCTAA AGCACCCAAC GAAGAGACAT CTGGTCATTG GCAACTCTGG CGATTCAAAG TACCTAGACC TTCCAGTTCT CAATGAAGAG AAAATGTATA TAGCTAATGA AGGTTATTGC TACATGAACA TTTTCTTTGC TCTACTAGTG AATGTCAAGG AAGAGGATGC AAAGGACTTC ACCAAGTTTA TAAGGGACAC AATTGTTCCA AAGCTTGGAG CGTGGCCAAC AATGCAAGAT GTTGCAACTG CATGCTACTT ACTTTCCATT CTTTACCCAG ATGTCCTGAG AGCTGAACTA CCCAGAATTT TGGTTGATCA TGACAACAAA ACAATGCATG TTTTGGATTC GTATGGGTCT AGAACGACAG GATACCACAT GTTGAAAATG AACACAACAT CCCAGCTAAT TGAATTCGTT CATTCAGGTT TGGAATCCGA AATGAAAACT TACAATGTTG GAGGGATGAA CCGAGATGTG GTCACACAAG GTGCAATTGA GATGTTGATC AAGTCTATAT ACAAACCACA TCTCATGAAG CAGTTACTTG AGGAAGAGCC ATACATAATT GTCCTGGCAA TAGTCTCCCC TTCAATTTTA ATTGCCATGT ACAACTCTGG AACTTTTGAG CAGGCGTTAC AAATGTGGTT GCCAAATACA ATGAGGTTAG CTAACCTCGC TGCCATCTTG TCAGCCTTAG CGCAAAAGTT AACTTTGGCA GATTTGTTCG TCCAGCAGCG TAATTTGATT AATGAGTATG CGCAGGTAAT TTTGGACAAT CTGATTGACG GTGTCAGGGT TAATCATTCG CTATCCCTAG CAATGGAAAT TGTTACTATT AAGCTGGCCA CCCAAGAGAT GGACATGGCG TTGAGGGAAG GTGGCTATGC TGTGACCTCT GAAAAGGTGC ATGAAATGTT GGAAAAAAAC TATGTAAAGG CTTTGAAGGA TGCATGGGAC GAATTAACTT GGTTGGAAAA ATTCTCCGCA ATCAGGCATT CAAGAAAGCT CTTGAAATTT GGGCGAAAGC CTTTAATCAT GAAAAACACC GTAGATTGCG GCGGACATAT AGACTTGTCT GTGAAATCGC TTTTCAAGTT CCACTTGGAA CTCCTGAAGG GAACCATCTC AAGAGCCGTA AATGGTGGCG CAAGAAAGGT AAGAGTAGCG AAGAATGCCA TGACAAAAGG GGTTTTTCTC AAAATCTACA GCATGCTTCC TGACGTCTAC AAGTTTATCA CAGTCTCGAG TGTCCTTTCC TTGTTGTTGA CATTCTTATT TCAAATTGAC TGCATGATAA GGGCACACCG AGAGGCGAAG GTTGCTGCAC AGTTGCAGAA AGAGAGCGAG TGGGACAATA TCATCAATAG AACTTTCCAG TATTCTAAGC TTGAAAATCC TATTGGCTAT CGCTCTACAG CGGAGGAAAG ACTCCAATCA GAACACCCCG AGGCTTTCGA GTACTACAAG TTTTGCATTG GAAAGGAAGA CCTCGTTGAA CAGGCAAAAC AACCGGAGAT AGCATACTTT GAAAAGATTA TAGCTTTCAT CACACTTGTA TTAATGGCTT TTGACGCTGA GCGGAGTGAT GGAGTGTTCA AGATACTCAA TAAGTTCAAA GGAATACTGA GCTCAACGGA GAGGGAGATC ATCTACACGC AGAGTTTGGA TGATTACGTT ACAACCTTTG ATGACAATAT GACAATCAAC CTCGAGTTGA ATATGGATGA ACTCCACAAG ACGAGCCTTC CTGGAGTCAC TTTTAAGCAA TGGTGGAACA ACCAAATCAG CCGAGGCAAC GTGAAGCCAC ATTATAGAAC TGAGGGGCAC TTCATGGAGT TTACCAGAGA TACTGCGGCA TCGGTTGCCA GCGAGATATC ACACTCACCC GCAAGAGATT TTCTTGTGAG AGGTGCTGTT GGATCTGGAA AATCCACAGG ACTTCCATAC CATTTATCAA AGAGAGGGAG AGTGTTAATG CTTGAGCCTA CCAGACCACT CACAGATAAC ATGCACAAGC AACTGAGAAG TGAACCATTT AACTGCTTCC CAACTTTGAG GATGAGAGGG AAGTCAACTT TTGGGTCATC ACCGATCACA GTCATGACTA GTGGATTCGC TTTACACCAC TTTGCACGAA ACATAGCTGA GGTAAAAACA TACGATTTTG TCATAATTGA TGAATGTCAT GTGAATGATG CTTCTGCTAT AGCGTTTAGG AATCTACTGT TTGAACATGA ATTTGAAGGA AAAGTCCTCA AAGTGTCAGC CACACCACCA GGTAGAGAAG TTGAATTTAC AACTCAGTTT CCCGTGAAAC TCAAGATAGA AGAGGCTCTT AGCTTTCAGG AATTTGTAAG TTTACAAGGG ACAGGTGCCA ACGCCGATGT GATTAGTTGT GGCGACAACA TACTAGTATA TGTTGCTAGC TACAATGATG TTGATAGTCT TGGCAAGCTC CTTGTGCAAA AGGGATACAA AGTGTCGAAG ATTGATGGAA GAACAATGAA GAGTGGAGGA ACTGAAATAA TCACTGAAGG TACTTCAGTG AAAAAGCATT TCATAGTCGC AACTAACATT ATTGAGAATG GTGTAACCAT TGACATTGAT GTAGTTGTGG ATTTTGGGAC TAAGGTTGTA CCAGTTTTGG ATGTGGACAA TAGAGCGGTG CAGTACAACA AAACTGTGGT GAGTTATGGG GAGCGCATCC AAAAACTCGG TAGAGTTGGG CGACACAAGG AAGGAGTAGC ACTTCGAATT GGCCAAACAA ATAAAACACT GGTTGAAATT CCAGAAATGG TTGCCACTGA AGCTGCCTTT CTATGCTTCA TGTACAATTT GCCAGTGACA ACACAGAGTG TTTCAACCAC ACTGCTGGAA AATGCCACAT TATTACAAGC TAGAACTATG GCACAGTTTG AGCTATCATA TTTTTACACA ATTAATTTTG TGCGATTTGA TGGTAGTATG CATCCAGTCA TACATGACAA GCTGAAGCGC TTTAAGCTAC ACACTTGTGA GACATTCCTC AATAAGTTGG CGATCCCAAA TAAAGGCTTA TCCTCTTGGC TTACGAGTGG AGAGTATAAG CGACTTGGTT ACATAGCAGA GGATGCTGGC ATAAGAATCC CATTCGTGTG CAAAGAAATT CCAGACTCCT TGCATGAGGA AATTTGGCAC ATTGTAGTCG CCCATAAAGG TGACTCGGGT ATTGGGAGGC TCACTAGCGT ACAGGCAGCA AAGGTTGTTT ATACTCTGCA AACGGATGTG CACTCAATTG CGAGGACTCT AGCATGCATC AATAGACGCA TAGCAGATGA ACAAATGAAG CAGAGTCATT TTGAAGCCGC AACTGGGAGA GCATTTTCCT TCACAAATTA CTCAATACAA AGCATATTTG ACACGCTGAA AGCAAATTAT GCTACAAAGC ATACGAAAGA AAATATTGCA GTGCTTCAGC AGGCAAAAGA TCAATTGCTA GAGTTTTCGA ACCTAGCAAA GGATCAAGAT GTCACGGGTA TCATCCAAGA CTTCAATCAC CTGGAAACTA TCTATCTCCA ATCAGATAGC GAAGTGGCTA AGCATCTGAA GCTTAAAAGT CACTGGAATA AAAGCCAAAT CACTAGGGAC ATCATAATAG CTTTGTCTGT GTTAATTGGT GGTGGATGGA TGCTTGCAAC GTACTTCAAG GACAAGTTCA ATGAACCAGT CTATTTCCAA GGGAAGAAGA ATCAGAAGCA CAAGCTTAAG ATGAGAGAGG CGCGTGGGGC TAGAGGGCAA TATGAGGTTG CAGCGGAGCC AGAGGCGCTA GAACATTACT TTGGAAGCGC ATATAATAAC AAAGGAAAGC GCAAGGGCAC CACGAGAGGA ATGGGTGCAA AGTCTCGGAA ATTCATAAAC ATGTATGGGT TTGATCCAAC TGATTTTTCA TACATTAGGT TTGTGGATCC ATTGACAGGT CACACTATTG ATGAGTCCAC AAACGCACCT ATTGATTTAG TGCAGCATGA GTTTGGAAAG GTTAGAACAC GCATGTTAAT TGACGATGAG ATAGAGCCTC AAAGTCTTAG CACCCACACC ACAATCCATG CTTATTTGGT GAATAGTGGC ACGAAGAAAG TTCTTAAGGT TGATTTAACA CCACACTCGT CGCTACGTGC GAGTGAGAAA TCAACAGCAA TAATGGGATT TCCTGAAAGG GAGAATGAAT TGCGTCAAAC CGGCATGGCA GTGCCAGTGG CTTATGATCA ATTGCCACCA AAGAATGAGG ACTTGACGTT TGAAGGAGAA AGCTTGTTTA AGGGACCACG TGATTACAAC CCGATATCGA GCACCATTTG TCATTTGACG AATGAATCTG ATGGGCACAC AACATCGTTG TATGGTATTG GATTTGGTCC CTTCATCATT ACAAACAAGC ACTTGTTTAG AAGAAATAAT GGAACACTGT TGGTCCAATC ACTACATGGT GTATTCAAGG TCAAGAACAC CACGACTTTG CAACAACACC TCATTGATGG GAGGGACATG ATAATTATTC GCATGCCTAA GGATTTCCCA CCATTTCCTC AAAAGCTGAA ATTTAGAGAG CCACAAAGGG AAGAGCGCAT ATGTCTTGTG ACAACCAACT TCCAAACTAA GAGCATGTCT AGCATGGTGT CAGACACTAG TTGCACATTC CCTTCATCTG ATGGCATATT CTGGAAGCAT TGGATTCAAA CCAAGGATGG GCAGTGTGGC AGTCCATTAG TATCAACTAG AGATGGGTTC ATTGTTGGTA TACACTCAGC ATCGAATTTC ACCAACACAA ACAATTATTT CACAAGCGTG CCGAAAAACT TCATGGAATT GTTGACAAAT CAGGAGGCGC AGCAGTGGGT TAGTGGTTGG CGATTAAATG CTGACTCAGT ATTGTGGGGG GGCCATAAAG TTTTCATGAG CAAACCTGAA GAGCCTTTTC AGCCAGTTAA GGAAGCGACT CAACTCATGA ATGAATTGGT GTACTCGCAA GGGGAGAAGA GGAAATGGGT CGTGGAAGCA CTGTCAGGGA ACTTGAGGCC AGTGGCTGAG TGTCCCAGTC AGTTAGTCAC AAAGCATGTG GTTAAAGGAA AGTGTCCCCT CTTTGAGCTC TACTTGCAGT TGAATCCAGA AAAGGAAGCA TATTTTAAAC CGATGATGGG AGCATATAAG CCAAGTCGAC TTAATAGAGA GGCGTTCCTC AAGGACATTC TAAAATATGC TAGTGAAATT GAGATTGGGA ATGTGGATTG TGACTTGCTG GAGCTTGCAA TAAGCATGCT CGTCACAAAG CTCAAGGCGT TAGGATTCCC AACTGTGAAC TACATCACTG ACCCAGAGGA AATTTTTAGT GCATTGAATA TGAAAGCAGC TATGGGAGCA CTATACAAAG GCAAGAAGAA AGAAGCTCTC AGCGAGCTCA CACTAGATGA GCAGGAGGCA ATGCTCAAAG CAAGTTGCCT GCGACTGTAT ACGGGAAAGT TGGGAATTTG GAATGGCTCA TTGAAAGCAG AGTTGCGTCC AATTGAGAAG GTTGAAAACA ACAAAACGCG AACTTTCACA GCAGCACCAA TAGACACTCT TCTTGCTGGT AAAGTTTGCG TGGATGATTT CAACAATCAA TTTTATGATC TCAACATAAA GGCACCATGG ACAGTTGGTA TGACTAAGTT TTATCAGGGG TGGAATGAAT TGATGGAGGC TTTACCAAGT GGGTGGGTGT ATTGTGACGC TGATGGTTCG CAATTCGACA GTTCCTTGAC TCCATTCCTC ATTAATGCTG TATTGAAAGT GCGACTTGCC TTCATGGAGG AATGGGATAT TGGTGAGCAA ATGCTGCGAA ATTTGTACAC TGAGATAGTG TATACACCAA TCCTCACACC GGATGGTACT ATCATTAAGA AGCATAAAGG CAACAATAGC GGGCAACCTT CAACAGTGGT GGACAACACA CTCATGGTCA TTATTGCAAT GTTATACACA TGTGAGAAGT GTGGAATCAA CAAGGAAGAG ATTGTGTATT ACGTCAATGG CGATGACCTA TTGATTGCCA TTCACCCAGA TAAAGCTGAG AGGTTGAGTA GATTCAAAGA ATCTTTCGGA GAGTTGGGCC TGAAATATGA ATTTGACTGT ACCACCAGGG ACAAGACACA GTTGTGGTTC ATGTCACACA GGGCTTTGGA GAGGGATGGC ATGTATATAC CAAAGCTAGA AGAAGAAAGG ATTGTTTCTA TTTTGGAATG GGACAGATCC AAAGAGCCGT CACATAGGCT TGAAGCCATC TGTGCATCAA TGATTGAAGC ATGGGGTTAT GACAAGCTGG TTGAAGAAAT CCGCAATTTC TATGCATGGG TTTTGGAACA AGCGCCGTAT TCACAGCTTG CAGAAGAAGG AAAGGCGCCA TATCTGGCTG AGACTGCGCT TAAGTTTTTG TACACATCTC AGCACGGAAC AAACTCTGAG ATAGAAGAGT ATTTAAAAGT GTTGTATGAT TACGATATTC CAACGACTGA GAATCTTTAT TTTCAGAGTG GCACTGTGGA TGCTGGTGCT GACGCTGGTA AGAAGAAAGA TCAAAAGGAT GATAAAGTCG CTGAGCAGGC TTCAAAGGAT AGGGATGTTA ATGCTGGAAC TTCAGGAACA TTCTCAGTTC CACGAATAAA TGCTATGGCC ACAAAACTTC AATATCCAAG GATGAGGGGA GAGGTGGTTG TAAACTTGAA TCACCTTTTA GGATACAAGC CACAGCAAAT TGATTTGTCA AATGCTCGAG CCACACATGA GCAGTTTGCC GCGTGGCATC AGGCAGTGAT GACAGCCTAT GGAGTGAATG AAGAGCAAAT GAAAATATTG CTAAATGGAT TTATGGTGTG GTGCATAGAA AATGGGACTT CCCCAAATTT GAACGGAACT TGGGTTATGA TGGATGGTGA GGATCAAGTT TCATACCCGC TGAAACCAAT GGTTGAAAAC GCGCAGCCAA CACTGAGGCA AATTATGACA CACTTCAGTG ACCTGGCTGA AGCGTATATT GAGATGAGGA ATAGGGAGCG ACCATACATG CCTAGGTATG GTCTACAGAG AAACATTACA GACATGAGTT TGTCACGCTA TGCGTTCGAC TTCTATGAGC TAACTTCAAA AACACCTGTT AGAGCGAGGG AGGCGCATAT GCAAATGAAA GCTGCTGCAG TACGAAACAG TGGAACTAGG TTATTTGGTC TTGATGGCAA CGTGGGTACT GCAGAGGAAG ACACTGAACG GCACACAGCG CACGATGTGA ACCGTAACAT GCACACACTA TTAGGGGTCC GCCAGTGATA GTTTCTGCGT GTCTTTGCTT TCCGCTTTTA AGCTTATTGT AATATATATG AATAGCTATT CACAGTGGGA CTTGGTCTTG TGTTGAATAG TATCTTATAT ATTTTAATAT GTCTTATTAG TCTCATTACT TAGGCGAACG ACAAAGTGAG GTCACCTCGG TCTAATTCTC CTATGTAGTG CGAG 
Length9494
Protein Sequence
Protein Residue
A.thaliana
AGI-code
Description
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
1 Virus2917
2 Virus2930
3 Virus3106
4.24264 Virus2947
4.47214 Virus3489
4.47214 Virus3842
4.89898 Virus3865
5.19615 Virus3578
5.47723 Virus2857
6.245 Virus3086
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression