Detail



ID : Virus3086

     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
DescriptionChilli_ringspot_virus|plants|ssRNA
Sequence
TCAAGCAATC AAGCATTCAA GCAATTCACT TGCCATTCTT ACATTTTCAC ACGCATTATT TCAACAATGT CGATGTTCAA CATTACTTAT CTCTTGGGCA AGCAAGTCAG CCAGCAATCA TGCAACAGGG TGACTGTTGC TTCGAGTGTG ATGGCTCCAA ACATACAATT TGGAACCATA ACTAGTGACG TGCTAGTTAA CGGAGACTCA AAGCCCAGAA TCACTGAAAT TAATGAACTA AGGACTGTGG CTGAACCGAA GCCATTGGCA CCAATTGCGT GCTCACAATT CACAGCGAAC TGTCTGTCTG AGTACAATGA TAGTCAGGAC AAATTCCACA AGATGTGTCT TGCAAAACTT AATGAGGCAC ATAAAAGAGT TGCCAGCGTC ACCAAGGATA GCCATGGTAC CCTCAAGTAC AAACGCATGA CTCATGCGAA GTATGCGAGG AAAGTAAGAA GGAACGAGCG CTTGGACAAA GAGAGGCAGG CGTTCTTGAA TGCTGACCCA TATGTGATAA CCTCGCTCAA GATTGCCTTT GGCGATCGTG AAGCTGGGGT AGACTGTGCA CCGAAGGGAC GTATCCACAC AACACCAAGT ACTAAACGGA AGAAAGCACT TAAGAAAGTT CTAAAGCTTA AGCGCATGAG CGTCATGGAT TTAGCTAACA GCATTTGTAA GCCTTTCATA GACAGTGGGA AACCTATTGA AATCATAGGC CGAAGAAACA AACATATTGC TCACTGTAGA ACGGTGTGGA AAGGTGACCG GCGCGTTCTG AAAGTCAAAA CGCACCACGA AGAGAGTGTC ATGCGGAATG TCGATGTTAA CCTTACCCAC GACACCAATA AACTCATCGA GGTGCTTGCA GAAGCAGCTT ACACAGGTCG CGCCTTGCGA GATTCTGAAA TAGTTAGAGG ATTTAGTGGG TTTGTAATAC CGAAATCTCG TATACCCGAC TTAAAGACGG CGGATAATTA TAAATTCCTT GTCGTAAGAG GAAGGTGGAG AAAGACATTA GTTGACGCCC GAGTGCACAT AAGTCCTGAG ATACTTGAAG GCATCAATCA CTACTCAATA GCGAACAAGT TTTGGGATGG CTTTGAGCAA GCATTTATAA AACATCGATC CAATCCTGTG ATTCATGAAC GTGATGATAG CACCTTGGAT GTAAAACAGT GTGGATCAGT CTCTGGAGTG GTGTGTCAAG CATTGATGCC ATGTTGCAGA ATTACGTGTG GGAAGTGCGC CGATAATTAT GCTCAGATGA GCTCTACCGA AATACGGAAC CACATCACGA GCACTCTCTC CAATGGGATC AAAATTCTGA AGCAACAGCA TCCTGATTTT CCTCATATGA TTGCAATGCT TGAATCGTAC AAGACGATGC TGAATTCAGT CAACACCAAC AGGGAAGCTT GTGGAAAAAT TCATTTCCTT ATAGGTGATC GGACCGAGCA GCCTTTTATA CATGTACTAC GTGTCAACGA GGTGTTGATC AAAGGTAACA GAGCTACAAG TGGAGAACTT GAAGGAGCCT CAAATGAGCT TCTGGAGGTA GCGCGTTATT TGAAGAACAG AACTGATAAC ATCAAGCAAG GAAGCCTAAC AACATTTAGA AACAAAGTTT CTGCCAAGGC ACACCTGAAC CCATCTCTAA TGTGCGATAA CCAGTTAGAT GTTAATGGCA ATTTTGTGTG GGGAAAAAGA GGGTACCATG CAAAAAGATT TTTCTCCAAT TATTTTGATG TTATCGTCCC CTCAGATGGA TACGATAAGT ACGCCATCAG GAGGTTCCCA AATGGCACCC GGAAACTTGC TATCCAGAAC TTGATACTTC CAAGGGACTT AGGCCAACTC CACAGACAGA TTGAAGGAGA GTCAATTGAG CTACAGCCCT TGTCAACAAA GTGCATAAGC AAGCGCCATG AACGGAACAT ATACCCGTGC TGCTGTGTCA CTTTAGAAGA TGGGACACCA GAGTATTCTG AATTCAAGGC ACCGACCAAA AACCACATTG TACTTGGAAA TTCTGGAGAT TCAAAGTATT TGGACATGCC TGCAGACATT AGCGAAAACC TGTATATAGC GAAAGAGGGT TATTGCTACA TAAATATCTT CTTGGCCATG TTGGTGAATG TGGATGAGAA AGACGCCAAA GACTACACGA AGTGGGTAAG AGATGTTGTT TCTGAGCAGC TTGGGCAATG GCCAACTATG TTGGATATCG CACTTGCATG CTACCAATTG TCAGTCTTGT TTCCTTCAGT TAAGTCAGCA GAGCTCCCAC GTATACTGGT TGACCACAAA ACCCAGACAA TGCATGTGAT TGATTCATTT GGATCTGCAA CCACGGGGTA TCATATACTT AAAGCAAACA CAGTCACCCA ACTTGAAAAG TTCGCAAGCG ACACACTTGA TTCAGAAATG AAATACTACA GAGTCGGAGG CCTAATTGAT GGCTCAGAGA CAGATGTGGC AGCACTACAA ACAGTGATAA AAACAGTCTG CAGGCCAAAG TTGTTAAAGG AGCTACTAAT GGATCATCCG TATCTTATAG TATTCAGCAT CATGTCGCCA TCAGTATTAC TAGCCATGTT TCGAAGTGGC AGCCTACATA GGGCATTGCT GTCAGTGCGG GGTCAGGAAC ACACCTTGAA AGTTTTAGTC AGCCTACTCA CTTTGTTAGC AACCAAGCTC TCTCGAAGTG ACACCATCTT TAAGCGATTT GATATTATTC AGAACCATGT ACATAAGTTT AGAGATGTAG TTCTTGATGG TGATGTACAT AGTATGTCAA GGAAGTTAGC AGAGAGATAT TTAGAAGTTC AAGTTTCAAT AATTGAATCG CAAAATGAAA CAGAGGCTCT CGGGTTCAGA ACAACACGAT TCAAAGGATT CCATCTTGTG GAAAAAATTT ATCAAGAGGA CTTGGAGGCG CAATGGCGCG AATTGCCATT GTTTCAAAAA TTATATTTTA CAGCTTGGCA ATTAAGGCAT CGGCGAGCAT TAGAAGTGAT GCTTGGAGAA AAAGACACAA AAGAGCACTG CAAACTCTTG CACTCATTGA AAAGAAATGC ATCACACTGT CTTAGAAAGA CGCTAGTGCC CTTTAAAGCA GGTTATTCTA AGTGCACTCA AGTACCAGGT TTTGTACATA AACGAATGAG ATGTAAATTA CTGCACAGTC TTTCATATTT CTTTAGTGAT GCTTTAAGAT TTATACAAGT ATTAGCAGTT ATTAGTATAT TAATGTCTAT ACTTCAGCAG TTGTATGATA GCATGGTAAA GTACAGATCG TACAAAATCT TAGCTATTCG ACAAGAAGAT TCAAAGAAAG ACGAGGCCCT CGAAAGGCTT CACTCACACC TGTATTATAA ATTGGGAGTT CTCCCAACTT ACGATGAATT TTGTAAATTC GTCCAGGAAC AAAGTCCCGA ACTGCTTGAT CACATGGGAG GGTATCATGG TAACGAAGTT GTTGAACATC AAGCTAAACG TGAATCTGAA GTAAGACTTG AGCAAATCGT TGCATTTATG GCACTTGTCA TGATGATATT TGATAATGAC CGAAGCGATT GTGTTTACCG CGTCTTAAAC AAGTTCAAAA ACATTGTCAG TACAGCTGAG CAAGATGTTG TACATCAAAG TTTGGATGAC ATTCAGACAA ACTTTGAAGA GAGAAATGAG ACAATAGACT TTGAACTTAC AACAGAGGAC ACGCCAGCAA CACCGTTCAA GTCTGCAACA TTTGAAAGTT GGTGGGATAA ACAATTGGAA ATGGGTCACA CAGTGCCTCA CTATAGGACA GAAGGGCATT TCATGGAGTT CTCACGCGAC ACTGTCGTTA GCGTCGTACA GAACATCGTT CTTAGTGAGA AGCGTGATTT TCTCATACGC GGTGCAGTTG GTTCAGGTAA ATCAACGGGG TTGCCAGCAC AACTTGCAAA GAAAGGTAAG GTGTTGATAG TTGAACCCAC ACGGCCTTTG TCACAAAATG TCTTTAATCA ATTGCGGTCG CAACCATTCC ATCTGAGCCC TACATTAATG ATGAGAAATT CATCACACTT TGGCTCAACA CCTATCAGTA TAATGACGAG TGGATTCGCT CTTCATTACT TGGCAAATAG TGGAACAGCA TTATCAACTT TTGACTATGT GATTCTTGAT GAGTGCCATG TTCTGGACTC CAATGCAATG GCTCTCTACA GCTTGCTACT CGAGAGGGAC TTCAACGGAA AGATACTCAA GGTATCAGCA ACACCGCCAG GTAGAGAGGT CGAATTCAGC ACACAATTCC CAGTGGAGCT TAGGGTTGAA GAATCCCTTT CATTCCAGCA GTTTGTGGAC AATCAAGGGA CCAGTGTAAA TAGTGATGTC ACACAGGTAG CCAACAATAT ATTAGTATAT GTAGCCAGCT ATAATGAGGT AGATCAACTT AGCAAGATGT TAGCTGCTAG AAACTTCAAA GTTACAAAGG TCGATGGGAG AACGATGAAG AATAGCACCA CTAACATATC AACAAGCGGC ACCACCAAAA AGAAACACTT CATAGTGGCA ACAAACATCA TAGAAAATGG TGTCACTCTT GATATTGAAG CAGTAGTGGA TTTTGGCACG AAAGTCGTTC CAAGTCTTGA TGTTGATTGT CGTAGCATAC GGTACTGCAA GGGTCCAATT AACTATGGTG AACGCATCCA GAGACTCGGA AGAGTTGGAA GAGTGAAGCC TGGTGTGGCT TTACGTATTG GATACACACA AAAGGGCATT GAAGCCATAC CAAATGTAAT TGCCACAGAG GCTGCTTTTC TATGCTTTGT GTATGGCCTC CCAGTCATGA CTTCACAAGT TTCAACTAGT TTGCTAGGTA AATGCACAGT GCAACAAGCT AGGACTGCAA AACTGTTCGA ACTACCGCCA TACTTCATGA TAAATTTCAT TGACTCAAAC GGTAGCATGC ACCCACAAAT CCATGAATTG CTCAAGAAGT ATAAACTTAG AGAATCTGAG CTCCAACTCA ATCGCATGGC AATTCCATAT GCACAAACAA GCAAGTGGAT CTCCGTACGT GATTACAATA GAAGTGGCCA TGTCCTTCAA ATGGACCCTG ATTGTAAAAT TGCCTTTTTG ATTAAGGAGA TACCAGATGA AACATATGAG AAGTTATGGA AGACAACAAA TGACTGCAGG GGAGATGCTG GGTTCAAGAA ACTAGCAACA TATAACGCAG CGAAAATATC TTATAAGCTT AGAACTGATG TACACTCAAT TCAGAGAACA ATCAGGATAA TCGAGCAGTT AATTACAGCA GAGCGTGAAA AGCAGGCCCA TTTCGAATCG TTAACAAGCT TTTCACTCAG TTCTCAATGT TACTCCTTGC AGTCCATTTG CAATGCCTAT AAATCCAGAT ATGCAAAGAA TCACACAACA GAAAATATCA GTGTTTTGGA GGCTGCGAAA TCTCAGCTTG TTGAATTCTT CAACGTCCAT AGTGCAGATA TTTTGGTTGG AGATTTATCA GATAGGCGAG TTCAGGACGA AGTAAAAGAT TTTGGAGCTT TAGAGGCAGT TCTACATGAA AGCAAAGAGG GTGTTTCAAA AGCCCTAAAG CTCAAGAGCA GGTGGAATAA GAGCTTATTA ACAAGGGATG TCCTTGTTTG TGCTGGAGTT GCAGTTGGGG GAGTGTGGCT ACTATATCAA TATCTGGTTG ACCAATTTAA AGCCCCAGTG TCTCACCAGG CAAGGAATAA AAGGAGCAAC CAGAAGTTGA AGTTCAGAAA TGCCAGAGAT GCAAAGGTTG GTCGTGTAAT TATCGACGAT GACTCAGGGG CCGTCGAACA TTTCTTTGGT GCAGCATACA CAAAGAAAGG GAAAAAGTCT GGAAAGCAAG TTGGTCTTGG AAAGAAGACA AGGAGATTTG TCAATATGTA TGGATTTGAC CCCACTGAGT ATGCGTACAT CCGGTTTGTT GATCCGATAA CAGGTGAGAT GCTTGATGAA AATCCAATGG CGGACATAAT GTTAGTGAAG GATCATTTTG ACGACTTGAG GCATGAATTC CTTATGGATG ACAAGATTGA CATGCAGGCT TTGTATAGTA ATCCTGGATT AGAAGCTTAT TTTGTCAAAG ACAAAACAAG TCCCATTCTA AGAGTGGATC TAACAGGTCA TATCCCACTC AAGGTTTGTG ACCGTGCATC AACAATAGCA GGATTCCCAG AAAAGGAGGG CATTTTAAGA CAAACTGGTC CAGCTCAAAA ACTACCATTT GAAAAATTAC CCACATCTAA AGAGAGCGTT GATCACGAAG CAAAATCATT GACGCGTGGG TTGAGGGACT ACAACGGAGT CTCAAAATCC GTGTGCTTAC TAGTGAATGA TTCAGATGGG TGCACAACAA CAATACATGG AGTTGGATTT GGGCCATTAA TTATAACGAA TCGTCATCTG TTCAAGAGAA ATAATGGCGT ATTAACAATC CGTTCCATGC ATGGAGAGTT TAAGGTAGTT AATTCAGCTG CGATCAAAGT TTACCCAGTT GGAAACTGTG ACATTGTACT TCTCAAGATG CCAAAAGATT TTCCACCATT TCCCATGAAA CTGAAATTCA GAGTTCCACA GAGTAATGAT CTTGTGTGCT TAATCGGCTC AAACTTCCAA GAGAAGTTTG CATCCAGCAC AGTATCTGGT TCAAGCAACA TTAGCCATGT TGCAAATTCG AATTTCTGGA GACACTGGAT CGATACAAAA GATGGGCAGT GTGGTTTACC ACTAGTTGCT CAAAATGATG GACATCTGTT AGGAATTCAC AGTCTGACGA GTACTCACTC GGATCAAAAC TTTTTCACAG CATTTCCTGA AAATTTCAAA GAGTGCTTGG ATCAGACTGA CAGCATTTCA TGGGCAAAAG GTTGGCTGTA TAATCCAAAT GAAATTGGGT GGGGATCTCT CAAGCTCAAA GAAAGTAGCC CCAAAGGATT ATTCAAGATC GAGAAGCTAA TCGAAGATCT TAACACTGAA GTGGTAAGTG AACAATCAAA GACCAACTGG GTGTTTGAGC AACTATCTGG CAACTTGAAA GCAGTTTGTA AGAGTGAGAG TCAGTTAGTC ACAAAACATA CAGTGAAGGG CGAGTGTCAG CTTTTTCAAC TATACCTTAA TACTCATGAG GAAGCAAATA ATTACTTCCA ACCTTTAATG GGTCACTATC AAAAGAGCAA ACTAAACAAA GTTGCATACT TGAAGGATCT GCTTAAGTAC GCTACTGTGA TTGAGATTGG AAAAGTCAAC AGTGACACAT TCGAATTAGC TGTGAGCGAT ACAATCGCCG ATCTAATAAA TGCAGGATTT GAAGAGTGTG AGTATGTCAC AGATGAGCAA GCCATATTTG GAGCATTAAA CATGAAGGCA GCAGTAGGTG CACTTTACAA GGGTAAAAAG AGAGACTACT TCGAAGCCTT CACTGAACAG GAAAAGGAAC AAATAATTCA GGATAGCTGT GAAAGACTTT ACACTGGAAA ACTCGGTGTA TGGAATGGTT CAATAAAAGC AGAATTGAGG CCGAAGGAAA AGGTTGCACA AAATAAAACT AGAACATTCA CAGCCGCACC CCTCGACACT CTGCTAGCTG GCAAGGTGTG TGTTGATGAC TTCAATAACA CTTTCTATGC TTTGCATCTT AAAGGTCCTT GGAGCGTTGG CATGTCAAAA TTCTCAAGAG GCTGGAATCA TTTACTGAGT CAATTGCCAG ATGGATGGGT CTATTGTGAT GCTGATGGTA GCAGATTTGA TAGTTCGCTA ACTCCATACT TGATCAATGC AGTGCTCAGA ATAAGATTGC ACTTCATGGA AAACTGGGAT ATTGGTATTC AGATGCTTAA AAATTTATAT GCTGAGATTA TCTACACACC AATACTCACG GCTGATGGCA CAATCGTTAA GAAGTTCAAA GGAAACAACA GTGGCCAACC CTCCACAGTT GTCGACAACA CACTCATGGT GATAATAACA ATGCACTATG CAGCGCGAAG AGCAGGTCTA AATTACCAAG AGTTCTGTGA CAATGTTAAG TTTGTTGCCA ATGGAGATGA TTTGATCATA GCAGTGAAAC CTTGTAGGGA GTCTTTGCTA GACACACTAC AGGACACATT TTCTGAACTT GGTCTGACAT ATGACTTTAC AAATCGCACA AGAGATAAAA AGGATTTGTG TTTCATGTCG CACAATGGAG TGATGCGCGA TGGCATTTAC ATCCCTAAAC TCGAGAAAGA ACGGATTGTA TCAATTCTGG AATGGGATAG AGCATCTGAG CCACAAAATC GCTTAGAGGC CATCTGTGCA TCGATGATCG AGGCATGGGG TTATGACGAA CTTCTATATC AAATCCGCTT GTTCTATGCT TGGGTGCTAG AACAAGCACC CTACCGAGAG CTTGCAAAAC AAGGGAAAGC ACCATACATA TCGGAAGGCG CTCTCAAGAA GCTGTACACA GGAGAGGATT CAGACTTTCA GATCTACCTT CGCTCTCTCA TCCAAAGTCA ATGGAAGGAT GAAGACACAA TTGTTTACCA CCAAGCTGAT ACACAAGCCG TAGATGCTGG AAAGAGTACA CAGAGTTCAG AGAAGAAACC AGCAAACCCA GCCTCAGTGA GCAAAGTGGT AGCAGAAACA CCACGTGATA GAGATGTCAA TGTTGGTACA GCTGGTACAT TTTCTGTTCC TCGACTCAAA GGCATCTCAT CCAAGTTAAA TCTACCAATG ATAAACAAAA AGGCTGTAAT AAATTTGGAT CACCTCCTCA AGTACACACC GGATCAAGTA ACACTTTCAA ACACAAGAGC GCTAAATTCA CAATTTGCTT CGTGGTATGA GGGCGTTAAA ACTGATTATG ACCTAAATGA CTCACAAATG GAAATAGTTC TAAATGGTTT GATGGTTTGG TGCATTGTGT ATGGAACATC ACCAAATCTA AATGGAATGT GGGTCATGAT GGATGGTGAT GAACAAGTTG AGTACCCAAT CAAACCCCTC TTGGATCATG CTAGACCAAC TTTTAGACAA ATCATGGCAC ATTTCAGTAA CTTGGCAGAA GCTTACATAG AGAAGCGTAA TGCAGAGAAA CCATATATGC CAAGGTATGG TTTGCAGCGC AATTTGACTG ACATGACTCT AGCTCGGTAT GCATTCGATT TTTATGAGAT TAACTCAAAA ACACCAGCTA GAGCGAGAGA GGCTCACATC CAAATGAGGG CCGCAGCTGT TATGCACGCA AAGAACAATA TGTTTGGCCT GGATGGAAAT GTCAGCACCA AAGAGGAGAA CACAGAGCGA CACACTGCCA CGGATGTAAA TCGAGACATG CATCACTTGA TGGGAGTCAG AGGAGTGTAG AGCTCTTTTA CTATATATCT ATCTGCATAT ATAATATAGT ATCTAGTTTT CCTTTCTGAA CCAGTTGTCT TGACATTATA GTGTGGCGTA CCACGAAGTG TCACTACCAC CTGGATTTTT CTACGATCTG CCATTGTTGT AAGTGATGTT TTACATCGTT CAATGTTGGG TAGTGGAAAA GAAAAAAAAA AAAAAAAAAA AAAAA 
Length9595
Protein Sequence
Protein Residue
A.thaliana
AGI-code
Description
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
3.74166 Virus3489
5.09902 Virus2917
6.245 Virus3821
8.06226 Virus2930
8.24621 Virus3842
9.16515 Virus1499
9.48683 Virus3714
9.8995 Virus2947
10.9545 Virus3106
11.6189 Virus3792
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression