Detail



ID : Virus3908

     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
DescriptionYam_bean_mosaic_virus|plants|ssRNA
Sequence
CAACTCGACA AGACAACAAA GAATACAAAC GCATAAACCA ACCTCAGTTT ACTCAGCAAT CTTAAAGCTA CGGTTCTTCT GAAATTTAAT CACTTTCTTA TAATACTTTC AAGTGCACCA AATATAATGG CAACAATCAT GATCGGATCT GTTCAAATCC CATTGAGCAA CATGGCACGC AATCACCATG AGAAACTGGA GAAGCGTGTA GTGACACAAA ATTCTGTTGT GCCACCAAAG TCACTAATGG CAGTGGAAAT GCCATCACTG AGAAGCATAA GCCACAAGTT GAGTTTGGCA AGCAAAGAGA TGGAAGCTGC ATATAATGAC AGCATTCGAA AGATGGATGA GGCATTGCAA CGGAATTCTG AGTTGCAGAA GAGGCTACTT ATCAATAAGT ATAGCCACAT CCAACAGAAA AAGCATGGTG CTGTGTGTAT CAGACACTGC ACACAGATGC AAGCTACTGT ACGTGAAACG CGTGCAGAGC AAAGAAGGAA GGAGGAACTT GATTTCCTCG CAGGAAACTA TGAGCATAAG AGTTATATTG GTTCAATCAT TGAGCCAATT GCTAGGGCAA CTGGTCAGAG TGTGGGCTTC CGAAGTCCAT ACTGGAGGAG GAGCATCAAG AAAGCAGTGC ACATGAAAAA GACACCAAAG AAGGTTGATG TCTGTGTGGT GATGGATGCA ACTCTTCAAA TGGCTAGTGG GGAGCGCAGG CTTACTATTG AATTCATAGG CAAAAGGGGA AGGAAACTAG AAGCTCGCTA TGTTAAAAGG GGTATGGCAG TTATACCAAA GGTGAAGCTA CCTCATGAGG AAGGAGTGTA CAAACAAAAA GAGCTCGACT ATGAGCAATG GTCAGAGCAG TTCATTATGC TATGCACTCA TGCAAGGTAC AAGAAAATCT CGCCTGCAGA TATTAGCCCA GGTGATAGTG GGCTGGTATT CGATGAGAGA TCAAACATAA CCACTAATTT CTCAAAATTA CCACATATGG TAGTTAGAGG AAGACTCAAG GGAAAGATTA TCAATGCACT AGATGTCTGT GATGAAATGG CTTTAGTCCA TCATTATTCA GATGCACCTG AGTTGCAGTT CTTCAATGGA TGGCGGGAAA AATTTAACAA GTTAGTGCCA CATGTGCAAC CCCACAAGTG CACAGTCGAT TTCGATAATG CACATTGTGG AGGATTTGCT GCTATAATGA GTCAACTTTT GTACCCCGTC CACAAGTTAT CTTGCAACAC ATGCAGACAG CACATCCAAA GATTGAGTTT TGGGGAGTAC AAGCAATTTT TGATCGCAAA CATTGGCTGT CACAAGGACG TTTTTGATCA AGCTGGGGGC ATAATTGGAC TTGACGTGGT CAAGAAATTG GTTGAGAGAG CAACAAGTGA GAGCATGAAT CTCACCACAT CCATGGAAAT TGCACGCTTA ACGCACAATC ACAAGAGCAC AGCGATGTTG CAAATACAAG ACATTAACAG AGCACTCATG AAAGGATCAT CTGTCAATCA AGAAGAACTT GATCTCGCAT TGACTCAGCT GTTGGAGATG ACACGATGGT GGCAAAATCA TATGAATTTG TCTAAAGCAG ATCCACTCAA AAACTTCAGG AACAAGCGCT CATCAAAAGC CTTGTTAAAC CCTAATCTCT TGTGTGATAA TCAATTGGAC AAGAATGGCA ACTTCGTTTG GGGTGAGCGA GGTTATCATT CAAAAAGATT TTTCTCAAAC TTCTTTGATG AAGTGATACC GACTGAAGGG TATAACAAGT ATAGAATTAG GAAAAACCCA AATGGACAAA GGGAACTTGC AATTGGCTCG CTAATTGTAC CGTTGAGTCT CGAACGCGCT CGAATTGCAC TCAAAGGAAC AAGTATCAAG CTTGAGCCGA TCGGCCAATC TTGTACATCA ATGCAGAATG GCAACTTTGT GTACCCATGT TGTTGTGTGA CACTTGATGA TGGAACACCA TTGTATTCTG ATCTTAAGAG CCCGACCAAG AGACACTTAG TTGTGGGAAC ATCTGGTGAG CCCAAATATA TTGATCTTCC TCAAACAGAT GAGGAAAGGA TGTACATAGC AAAGGAAGGT TACTGCTACC TCAACATCTT TCTAGCAATG CTAGTCAATG TAAATGAAAA GGAAGCCAAG GATTTCACAA AGATGGTGAG AGATGTGGTC ATACCAATGT TGGGAACATG GCCGACAATG CAGGATCTTG CAACAGCTGT ATATATTCTT ACAGTTTTCC ACCCTGAAAC GAGGAATGCA GAGTTACCTC GTATATTGGT CGACCATGCA AGTCAAACCA TGCATGTTAT AGACTCGTTT GGCTCACTGA CAACTGGTTA TCACGTGCTC AAAGCGGGAA CAATTAACCA GTTGATCCAT TTTGCAGCAG AAGACCTCAC TGGTGAAATG AAACATTACA GAGTTGGTGG GGACGCAGCA CAAAGAATGA GGTGTGAATC AGCATTGATT ACAAGCATTT TCAAACCCAA ACGCATGATT CAGATACTGC AAAATGACCC TTACATGCTT CTCATGGGTT TGGTCTCTCC ATCATTGTTG GTCCATATGT ATAGATTGAA ACATCTTGAG AGAGCTATGG ACATTTGGAT TCAAAGAGAT TATAGTGTTG GAAAGATCAT TGCTTTGTTA GGACAGTTGA CCAGGAAGGT AGTAGTTTGT GATACACTTA AGGAGCAGCT AGATGTGATT AGCAATGCCT CAGGACATCT CCTCGATATG CTGAAGGACT GTCCACAAAC AATGCATTCG TACATGCCAG CTAGAGATCT CTTGACCATT TACCTTGAAA AACAGGCATC GGATGCGCAG TTGGTCAATA ATGGGTATAG TACCATAGAT GATTTACTAT ACATTGAACT TGAAAAAATG TATATAAATC GTTTGCGACA GGAGTGGCTA GGCTTAAGCT TGTGGGAAAA ATCTTCCTTA ACATGGCAAT TGAAGCGGTT TCCGATCAGT ATCGAAAAAG ATTTGACAGT GAGGGCTTCG CAAGGAAAAA GCGTGTTATC AAAAAGCTTT GTGAGCGATT GCTTCATAAG TGCGAAGTCA CACCTAAGAA GCAAAAGAGA TACTATTTGC AGGTCAATGG AGAGATTTTC CCACAGTGTG ATTAGGAAGT GTATAGGGTG CCTCTTTGGT ATTCTTAGAA AGTGCTACAG TGATATAATC TACCTAGTAA ATGTAGTCAT AATATTTTCA TTAATTGTAC AGATGACATC AACCATCCAT GGGATTGTAC ATTCAGCCAG GCACAATAAA CTCATTGTCA AGAAATTGCA GCAAGAAAGG GATGAAAAAG CAATAATTCA CATATATGAA ATGTGCTGCA AAGGAGAAAA GCAACCACCA ACACACACTT CATTCCTTGA ACATTTAAAA GAAGTCAGAC CGGATCTGGT GGCAACAGCT GAGAACATGA TAGGGACCAA AGAAACAGTA GCTACGCAAG CTAAAACAGC AACACAAGTT CAATTTGAGA AGATAATAGC TTTTATGGCT CTGTTGACCA TGGTGATAGA TACTGAGAGG AGTGATGCAA TTTTCAAAGT GCTTGGGAAA CTCAAAACAG TATTCTCGAC AATGGGTGAA GAAGTTCGTG TACAGAGTCT TGATGAGATT ATCAGCCTAG ACGAAGAGAA GCAACTAACA ATAGATTTTG ACATGGAATC TAGTAAGGAA ATTTCATCCA CTTCTTTTGA TGTCAAATTT GGTGATTGGT GGAATAGACA GTTGCAGCAA AACAGAGTGA TTGCGCACTA TAGGTGTAGT GGTAAGTTCA TCGAATTCAC AAGGGAAACA GCTGCAAAAG TGGCAAATGA GATATCAATT TCTGATGATA CAGATTTCTT AGTTCGTGGA GCAGTTGGAT CTGGAAAGTC AACAGGACTA CCACATCATT TGGCTAAGAA AGGAAAGGTT CTTCTTTGCG AACCGACAAG ACCACTTGCT GAAAATGTAA GTAGACAATT AGGAAAGGAG CCTTTCTATC AAAATGTCAC TTTGCAGATG AGAGGAATGA GCAAGTTTGG ATCAAGCAAC ATAACAGTGA TGACAAGTGG ATTCGCATTT CACTATTATG TCAATAATCC ACATCAGCTT TCAGATTTTG AATATATAAT AATTGATGAG TGTCATGTTA TGGACAGTGC AGCTATAGCC TTTCATTGTG CTTTGAAAGA ATTTGAATTC GCGGGCAAGT TGATCAAGGT GTCAGCAACA CCACCTGGGC GGGAGTGTGA ATTTACAACT CAATATCCTG TTAAGYTGAA AGTAGAAGAG CAACTCTCTT TTTCACAATT TGTGCAGGCT CAAGGTACAG GTTCAAATGC AGATATGGTG CAGCATGGGT CAAACCTACT GATTTATGTT GCAAGCTACA ATGAGGTTGA CCAATTGGCA AAGTTACTGA CGGAGAAGCA ATTTAAGGTC ACAAAAGTTG ATGGCAGGAC TATGCAAATG GGGAATGTGG AAATAACCAC AATGGGGACT GAAGGAAAGC CACATTTCAT AGTTGCGACA AACATCATAG AAAATGGTGT TACACTAGAT GTGGATTGTG TAGTGGATTT TGGACTGAAA GTCGTTGCAA CGCTTGATAG TGATTGTCGA TGTGTGCGCT ATGTCAAGAA ACCTGTCTCG TATGGTGAGC GCATTCAGCG TCTTGGCAGG GTTGGGCGCC ACAAACCTGG TTTCGCCTTG CGCATTGGGC ATACAGAAAA AGGCATTGAG GATATACCAG AATTTGTTGC AACAGAAGCT GCTTTCTTAT CATTTGCATA TGGCTTACCC GTCACAACTC AAAGTGTATC AATCTCTGGA TTGTCTCAAT GTACAGTTAA GCAAGCAAGG AGTGCACTGA ATTTTGAACT GACCCCACTC TTCACTACGC ATTTTATTAA GTATGATGGC ACAATGCATC CAGAGATTCA CAGGATACTA AAAGCTTTTA AGCTTAGAGA GTCAGAAATG GTTCTTAATA AGCTAGCTAT ACCGTATCAG TTCACTGGAC AATGGATGAC AGTTGAGGAG TATGAAAGAA TTGGGGTTAG AGTGAGCTGT GACAGAAAAG CTAGAATCCC ATTTTATGTG CACGGCATAC CAGATAAAGT GCTTGAGATG CTTTGGGACA CAGTCTGTAA ATACAAGTGT GATGCAGGAT TCGGTCGTCT GACAAGTGTG AACGCAACAA AGGTCAGCTA CACTTTGAGC ACTGATAGCA AGTCCATTCC CAGAACAATT GCCATCATAG ACCATCTCAT AGGGGAAGAA ATGATGAAAA AGAACCACTT TGATACAATT AGCTCAGCAA TCACAGGACA TTCCTTCTCA TTAAATGGCA TTGCGGAAGC TATCAGGAAG AGGTACTTGA AAGATCACAC ACAACAGAAT ATAGCCACCT TGCAGCAGGC AAAAGCACAG TTGCTTGAAT TCTCAAGCAT AAATTTCAAC CCTAACAATC TGCAATCACT TGAGGAACTA GGTGTCTTAA ACGCAGTGAG GCTGCAGAGC AAGGAGGAGA TGTGTAGGTT CTTAAATCTC AAAGGTAAAT GGGATGGAAA GAAGTTCATG AATGATATTG TGTTGGCAAC ATTAACCCTG ATTGGTGGTG GGTGGATGAT GTGGGAATAC CTCACAAAAA GAATGCAAGA GGATGTTGTG ACACAAGGTA AGAAGCGCAT GATACAGAAA CTTAAGTTTC GTGACGCATT TGATCGGAAG GTTGGGAGAG AAGTGTATGC TGATGATTAC ACAATGGAGC ACACATTTGG AGAAGCATAT ACAAAGAAGG GCAAACAGAA AGGCAGTACC AAGACAAAAG GAATGGGTCG GAAAACAAGG AACTTTATAC ATATGTATGG AGTGGAACCA GAGAATTATA GCATGATTAG GTTCGTCGAC CCGTTAACAG GTGCAACAAT GGATGAGAGT CCTAGGGTTG ACATCCGCCT TGTTCAGGAA GAATTTGGTG AAATAAGAAG ACAGAAGATA GAACAAGATG AGTTGTCGAC TGAGAAAGTG CGAAGTATGC CAGGTATTCA GGCTTATTTC ATAGGAAAGA ACACAGAAGA GGTTTTAAAG GTCGATCTAA CACCTCATAG GCCCACTCTG CTGTGTAAGA ACAGTAATGC AATTGCTGGA TTCCCAGAGA GAGAGAATGA GCTGAGACAG ACTGGATTGC CAACCCGTAT TGCAAGGAAT GAAGTGCCTG AGCCTAATGA AGATGTTGCT GTGGAAAGCA AATCAGTGTA TAAGGGCTTA AGAGATTACA ATGGGATTGC GAGCCTGGTT TGCCAACTAA CAAACACTTC AGACGGGCAT TGCGAAACCA TATACGGCAT TGGGTATGGT TCCTATATCA TCACGAATGG GCATTTATTC AAAAGAAACA ATGGAGTGCT GAATGTTAGA ACCTGGCATG GTGAATTTGA GATCAAAAAT ACCACTCAAA TCAAAATCCA CTTCATAGAA GGGAAGGATG CAATTTTGAT ACGAATGCCT AAAGATTTTC CCCCTTTCAT GAAGAAGAGT CTCTTCAGGC CACCTGTTAG AGAAGAAAGA GTCTGTATGG TGGGCACTAA TTTCCAGGAG AAAAGTCTTC GAGCCACCGT ATCAGAGTCA TCAATGATCA TGGCAGAAGG TGTTGGATCA TTTTGGATTC ATTGGATAAC GACCCAGGAT GGATATTGTG GTTTGCCACT CGTTTCTGTG AATGATGGGT ATATAGTTGG TTTCCACGGT TTAGCTTCAA ATTGCTCAGA TAAAAACTTC TTTGTTCCAT TTTGTGAAGA CTTTGAAGAG AAGTATCTGA GAAATGCTGA GTCACTCTCA TGGGATAAAC ACTGGTTTTG GCAGCCGGAT AAGATAGCAT GGGGTTCACT GAATCTTGTA GATGATCAAC CCAAAGAAGA GTTCAAAGTG TCAAAACTCA TCTCAGATTT ATTCACCAAC ACAGTGAAGA TACAAAGTAG CCAGTGCTGG GTTCTTGATG CACTTGAGGG CAATTTGAAG GCATGTGCAC ATGCGGAGAG TGCATTAGTC ACAAAGCATG TAGTGAAAGG AAAATGTCCA TTCTTTGAGC AGTATCTTAA CGAAAGAGAG GAAGCAGCCA CTTTCTTTAA ACCTCTAATG GGATCATATC AGCCAAGTAA GTTGAACAGG GAGGCTTTCA AGAAGGATTT CTTCAAGTAC AACAAAGTTG TAATTCTAAA TGAAGTGGAT CATGCATCTT TTGAAGCAGC AGTTCAAGGT GTGATCATGA TGATGAATGA GTTTGGATTC GCTGAATGCA CATATGTTAC TGATCCAGAT GAAATATACT CATCCCTCAA TTCAAAAGCT GCAGTTGGAG CACAATACAA AGGAAAGAAA CAGGACTATC TACAAGACAT GGATGAATTT GACAAAGAGC GACTCTTGTT TCTTAGCTGT GAAAGATTGT TTTACGGAAA GAAAGGTCTG TGGAATGGTT CACTCAAAGC TGAATTGAGA CCAACAGAAA AAGTTGTTGC AAATAAAACA AGAACTTTTA CAGCTGCACC AATTGACACA TTATTAGGTG CGAAGGTCTG TGTGGATGAC TTCAATAATC AGTTTTACAA CTTCAATTTA ATCTGTCCAT GGACGGTTGG AATGACCAAA TTTTATGGAG GATGGGACAA GTTGATGAGA AAGCTACCTG ATGGCTGGGT GTATTGCCAT GCTGATGGAT CACAGTTTGA TAGTTCATTA ACACCCCTTC TCCTGAATGC TGTTTTGGGA ATCAGAAAAT TTTTCATGGA AGAGTGGTGG GTTGGTGAGG AAATGTTAGA AAATCTGTAC GCAGAAATTG TGTATACACC AATTTTGGCT CCAGATGGCA CCATCTTCAA GAAGTTTCGA GGCAACAACA GTGGTCAGCC TTCTACAGTA GTTGATAATT CACTTATGGT TGTGATAGCG GTTTACTATG CTTGCCACAA GGTTGGGTGG AGTGATGAAG ACATACAAAA TAGACTGGTC TTCTTTGCAA ATGGTGATGA CATTGTGCTA TCAATGAAAG AAGAAGATTT AGGGGTTCTT GACACTTTTG CTGCCTCTTT TGCTGAGTTG GGATTGAATT ACAATTTTAA TGAAAGAACA AAGCAGAGAG AAGACCTTTG GTTCATGTCG CACCATGCAG TTGAGATTGA TGGCATGTAT GTGCCAAAGC TTGAGATGGA GCGAATTGTG TCAATTCTAG AATGGGACAG AAGCAAGGAA ATAATGCATA GAACTGAGGC AATTTGTGCA GCCATGATTG AAGCGTGGGG TTACACAGAG TTATTGCAAG AAATCCGTAA ATTCTACTTG TGGTTGCTTG AAAAAGGTGA ATTTAAAGAA TTGGCAGCAA ATGGAAAAGC ACCATACATA GCAGAATCAG CTTTGAGAAA ACTGTACACA AATAAGCATG TTGCTATGGA AGAGCTGATG AAGTATTTAG AGGTGCTCGA CTTTGATCAT GCGGTTGGTT GTGGTGATAC AGTGCATCTA CAGTCATTAG AAGAAAAGCA ACCAGAGTTA GATGCAGGAT CGGATTCAAA GACAAAGAAG GATAAGGGCA AGGAAGAGAA GAATGACCAC AGGAATAAGG CCGTAATAAG TGCAAAGGAT AAGGATGTGG ATGCAGGCTC AAAAGGAAGA ATTGTACCAC GGCTTCAAAA GATCACAAAG AAAATGAATC TGCCCATGGT GAAAGGGAAA ATGATATTAG ATTTAAACCA TTTGTTGGAA TACAAGCCAG AGCAGATAGA ACTTTTCAAT ACGAGAGCAT CTCGTAGTCA GTTTGAAGCA TGGTATAATG CAGTGAAACA GGAATATGAA CTTGATGATG GGCAGATGGC AATCGTGATG AATGGTTTCA TGGTTTGGTG CATTGACAAT GGAACTTCTC CTGATATCAA TGGAACATGG ATTATGATGG ATGGGGATGA GCAAGTTGAA TATCCACTGA AACCAATGGT AGAGAATGCT AAGCCAACTT TGAGACAAAT CATGCATCAT TTTTCAGAGG CAGCTGAAGC CTATATTGAA ATGAGAAATG CTGAGAAACC ATACATGCCT AGGTATGGTC TTCTAAGAAA TTTGAGAGAT AAAAATCTAG CTCGCTATGC TTTCGACTTC TATGAAGTTA CATCTAAGAC AACAGATCGG GCAAGGGAAG CAATAGCACA GATGAAGGCA GCAGCTCTCA GCAATGTTAA CAACAAGTTG TTTGGACTTG ATGGCAATAT TGCAACAACC AGCGAGAATA CTGAAAGGCA CACTGCTAGG GATGTGAACC AGAACATGCA CACATTGCTT GGAATGGGCC CTCCGCAGTA AAGGTCAGGT AAACTGGCCA CAGTTAGCAT CTCGCGTCAC TGAATAGTTT TATATAGTAA TATAATATGT TCTCTTTAGT TTCAGTGTGG TAACACCACC TTTTATGAAG CTTTTGTGAT AGAGTGGATT TTCCACCAAC ATATTACAAG TACTATATAT TTATGAAAGG TAGGAAGGAC CATTGCAGGA GCGAGGGGGC GTAGTGTGGT TACACCACGA ATCGCAAGGT AGCTTTGGCA ATGCTTGTTG TTCCAAAAAA AAAAAAAAA 
Length9649
Protein Sequence
Protein Residue
A.thaliana
AGI-code
Description
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
1 Ahg474865 Protein of unknown function (DUF784)
2 Virus3166
4.47214 Virus1648
4.58258 Virus0061
5.65685 Virus3098
9 Ahg482210 galactosyltransferase 13
9.38083 Virus3919
13.1909 Virus3552
14.4914 Ahg933971 Serinc-domain containing serine and sphingolipid biosynthesis protein
14.8661 Virus3785
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression