Detail


ID : Ahg311398

Blast(Query):  A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|311398|fgenesh1_pm.C_scaffold_1000178
Sequence
ATGTCGAAGG GTATAATTGT GTTGGAGGAA GGATGGCCCT TCATGGAGGC TGGTGTTACA AAGCTACATA GGATTCTGGA AGAATTGCCT GAGCCAGCAT TTGAGTCGGT TCAATATATG AATCTGTACA CGACTATCTA CAATATGTGT GTCCAGAAAC CTCCTCATGA TTTCTCACAG CAGCTTTATG ATAAGTATCG TGGAGTAATT GATGATTACA ATAAACAAAC AGTGTTGCCG GCTATAAGGA AGAAGCATGG TGAATATATG CTGAGAGAGC TTGTTAAGAG ATGGGCTAAC CATAAAGTTC TGGTTAGATG GTTATCCCGC TTCTTCGACT ATCTTGACCG TTACTTTGTT CCTCGGAGAA ATCTTCTAAC ACTGAATAGT GTTGGCTTGA CATCCTTTCG CGACCTGGTT TATCAAGAGA TACAGTCCAA TGCCAAAGAC GCTGTACTAG AACTTATTCA TAAAGAACGT GAGGGTGAAC AGATTGATAG ATCACTATTG AAAAACGTAA TAGATGTCTA TTGTGGGAAT GGAATGGGAG AGATGGTAAA ATACGAAGAG GATTTTGAAA GCTTCTTGCT TCAAGATTCT GCATCTTACT ATTCTCGCAA GGCCTCAAAG TGGAGCCAGG AGGATTCTTG TCCTGATTAC ATGCGAAAGG CTGAGGAGTG TCTAAAACTG GAGAAGGAGA GAGTCACTAA CTACCTTCAT TCAACCACTG AGCCGAAATT ACTTGGGAAA GTACAAAATG AGTTGTTGGT AGTGGTTGCA AAACAGCTTA TAGAAAATGA GCAGTCAGGG TGCCGTGCAT TGCTAAGAGA TGACAAGATG GATGATCTCT CCAGGATGTA CAAGCTTTAT CAACCAATCC TTCAAGGGTT GGATCCTGTT GCAGACTTAT TCAAGCAGCA TGTTACTGCA GAGGGAAATG CCCTTATCAA ACAAGCCGCC GACGCAGCTA CTAATCAGGA TGCAAGTGCT GGTGGCGTGC AGGACCAGGT GCTTGTCAGA AAAGAGATTG AGCTACACGA TAAATACATG GTCTATGTCG ATGAGTGTTT TCAGAAACAC AGCCTCTTCC ATAAGGCATT AAAAGAGGCA TTTGAAGTCT TCTGTAACAA AACAGTGGCT GGAGTGTCTA GTGCAGAAAT ACTTGCAACC TATTGTGATA ATATCCTCAA GACAAAAGGT GGAAGTGAGA AGCTTAGTGA AGAAGTTACT GAAATTACGC TTGAGAAAGT GGTTAAGTTG CTTGTTTATA TAAGCGACAA GGATCTTTTC GCCGAGTTTT ACAGGAAGAA ACAAGCCCGT CGGCTCTTAT TTGATCGCAG CGGTAATGAC GAGCACGAAA GAAGTATACT TACAAAGTTA AAAGAACTAC TCGGGGGGCA GTTTACTTCT AAGATGGAGG GCATGGTGAC GGATATAACA TTGGCAAAAG AGCAGCAAAC CAACTTCGCT GATTATCTAT CAGCTAGCCT GACCACAAAG CTGGGGATTG ATTTGACTGT CACTGTTCTT ACTACTGGTT TCTGGCCAAG TTACAAAACA TCTGACCTCA ATCTACCCAT TGAAATGGTC AACTGTGTTG AAGCTTTTAA AACCTTTTAT GGAACAATAA CCAAACACAG GAGACTTTCG TGGATTTATT CTCTGGGAAC TTGTCACATT TCTGGAAAAT TCGATAAAAA ATCATTGGAG TTAGTCGTTT CCACCTACCA GGCTGCGGTG CTTTTGCTCT TCAACAACGC AGAGAGATTG AGCTACACTG AGATGTTGGA GCAGCTAAAC CTTAGCCATG AAGATCTTGT CAGGCTGCTT CATTCACTGT CATGCGGGAA GTACAAGATT CTTATAAAGG AACCAATGTC GAGAACCATC TCTAAAACGG ATACGTTTGA ATTCAACTCC AAGTTCACCG ATAAGATGAG GAGAATTAGG GTGCCTCTGC CTCCAATGGA TGAGAGGAAG AAAGTTGTTG AAGATGTTGA TAAAGATAGA CGCTATGCAA TAGATGCAGC TCTTGTTCGG ATCATGAAGA GCAGAAAAGT GTTGGGGCAT CAACAGTTAG TCTCTGAATG TGTTGAGCAT CTTAGCAAAA TGTTCAAGCC TGATATAAAG ATGATAAAGA AACGGATTGA GGACTTGATC AGCAGAGATT ATTTGGAGAG GGATAGCGAA AATCCCAACA CTTTCAAGTA TGTGGCTTAG
Length2220
Protein Sequence
Protein Residue
Map Locationscaffold_1: 781303.. 785058
Download Sequence
A.thaliana
AGI-codeAT1G02980.1
Descriptioncullin 2
TAIR curator summaryencodes an Arabidopsis cullin
Alias[ATCUL2][CUL2][cullin 2]
Gene coexpression
MR
MR Locus Description
31.5753 Ahg316947 Pectin lyase-like superfamily protein
40.5956 Ahg926802
47.1169 Ahg892007
55.857 Ahg946012 Zinc finger, C3HC4 type (RING finger) family protein
65.4523 Ahg351609 Protein of Unknown Function (DUF239)
70.6045 Ahg899865 flavonol synthase 5
85.6096 Ahg947152
87.4986 Ahg330701 alpha/beta-Hydrolases superfamily protein
90.0555 Ahg897485
91.3893 Ahg917658 subtilase 4.13
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression