Detail



ID : Ahg311505

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|311505|fgenesh1_pm.C_scaffold_1000285
Sequence
ATGGAAAATA TGTTTAGACT CATGGCAAGT GAAGAATATT TCTCAGACCG GCGATGTGTT TGGGTCAACG GTCCGGTTAT CGTAGGAGCT GGTCCGTCCG GTTTAGCTAC AGCGGCTTGT CTACGTGATC AAGGAGTCCC ATTCGTTGTG GTCGAGAGAT CAGATTGCAT AGCTTCACTT TGGCAAAAAC GAACCTACGA CAGGCTTAAG CTTCACTTGC CCAAGAAATT CTGTCAATTG CCGACAATGC CCTTCCCGGA TCACTACCCT GAATACCCAA CGAAACGACA GTTCATCGAT TACCTTGAGT CATACGCAAA CCGGTTCGAG ATTAAACCGG AATTCAATAA AAGCGTCGAG TCTGCTCGGT TTGATGAAAC CAGCGGGCTA TGGAGGGTTA GAACAACCTC AGCCGGAGAG GAGATGGAAT ATATTTGCCG GTGGTTGGTG GTGGCGACGG GAGAAAACGC CGAACGTGTT GTCCCGGAGA TTAATGGGCT TAAGACGGAG TTTGACGGAG AAGTAATTCA TGCATGTGAG TATAAGTCCG GCGAAAAATT CAGAGGAAAG AGAGTTCTTG TCGTCGGATG TGGAAACTCC GGCATGGAAG TCTCTCTTGA TCTTGCTAAT CACAATGCTA TCACTTCCAT GGTCGTTAGA AGCTCGGTTC ATGTTTTACC GAGGGAGATT ATGGGGAAAT CAACATTTGG AATCTCAGTG ATGATGATGA AGTGGCTACC TCTATGGCTC GTAGACAAGC TTCTGCTAAT CTTATCGTGG CTTGTTCTAG GGAGCTTATC AAAGTATGGG CTCAAGAGGC CCGACATCGG CCCGATGGAG CTCAAAAGCA TGACAGGGAA GACGCCGGTT CTTGACATCG GTGCTCTGGA GAAGATAAAA TCCGGCGACG TAGAAATTGT ACCTGCAATC AAACAGTTCT CGCGTCACCA CGTGGAGCTA GTAGATGGTC AGAAGCTAGG TATCGACGCC GTGGTTCTCG CCACCGGCTA TCGTAGCAAT GTCCCTTCTT GGCTTCAAGA AAGTGAATTC TTTTCGAAAA ACGGGTTTCC GAAATCGCCG TTTCCAAACG CGTGGAAAGG GAAATCGGGA TTATACGCGG CCGGATTCAC GAGAAAAGGA TTGGCTGGGG CATCAGTAGA CGCCGTTAAC ATCGCTCAAG ACATTGGAAA TGTATGGAGA GAAGAGACCA AACGACAGAA GATGAGAAGA AATGTGGGTC ACCGAAGATG CATCTCAGTT GCTTAA 
Length1266
Protein Sequence
Protein Residue
Map Locationscaffold_1: 1257881.. 1259246
Download Sequence
A.thaliana
AGI-codeAT1G04180.1
DescriptionYUCCA 9
TAIR curator summary
Alias[YUC9][YUCCA 9]
Gene coexpression
MR
MR Locus Description
5.47723 Ahg325399 MEI2 C-terminal RRM only like 2
6.7082 Ahg311362
8.66025 Ahg320730 Galactose oxidase/kelch repeat superfamily protein
10.3923 Ahg482973 nodulin MtN21 /EamA-like transporter family protein
19 Ahg351609 Protein of Unknown Function (DUF239)
19.2354 Ahg942510 transposable element gene
23.516 Ahg938233 plastocyanin-like domain-containing protein
24.2899 Ahg479634 F-box and associated interaction domains-containing protein
28.3549 Ahg890578 HSP20-like chaperone
31.1127 Ahg471080 COBRA-like protein 6 precursor
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression