Detail



ID : Ahg312128

Blast(Query) A.halleri   /   A.thaliana (NOT RECIPROCAL)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|312128|fgenesh1_pm.C_scaffold_1000908
Sequence
ATGGATGATG ATGATCCCAA GTTGCCGATC TCTGGCAAAA GAAATATACT AATCACAAGT GCTCTGCCTT ACGTCAACAA CGTCCCTCAT CTCGGAAACA TCATTGGATG TGTTCTAAGC GCTGATGTGT ATGCTAGATA CTGTCGTCTC CGTGGCTATA ATGCCATATA TATATGTGGG ACTGATGAAT ATGGGACTGC TACTGAGACC AAAGCTCTTG AGGAGAATCG CACCCCAAGA GAAATCTGTG ACAAGTACCA TGCTATTCAT AAAGAAGTTT ATGACTGGTT TGATATTAGT TTTGACCAGT TTGGCCGAAC TTCAACTCCA CAACATACAC AAGTGTGCCA AGAAATTTTC AACAAATTGT GGGAAAACAA GTTGATTTCA GAGAACACTA TACAGCAGCT TTACTGCGAT ACATGCAACA AGTTCTTAGC TGACCGGCTT GTTGAGGGTT CCTGTCCACT ATGTAACTAT GACTCTGCTC GTGGAGATCA GTGCGAAAGC TGTGGAAAGC TCCTGAATCC TACTGAACTC ATTGCTCCGA GGTGCAAGGT CTGTCAAACC ACACCCGAAA TTCGCGACAC AGACCACCTA TTTATTGACC TTCCGAAGCT GAAGGCTCAG TTGGAAGCGT ATATTAATGG GACATCTGTT CGTGGATCTT GGAGTAGAAA TGCTGTTCAA ACGACAAATG CATGGATTAG GGAAGGGCTT CAACAGAGAT GCATTACAAG GGATTTAAAG TGGGGAGTTC CAGTCCCACA TGAGAAATAT AAGGATAAAG TCTTCTATGT TTGGTTTGAT GCTCCTATTG GATACGTCTC AATAACGTCA TGCTACACAT CTGAATGGGA GCAGTGGTGG AAGAATCCTA AGAATGCTGA GCTTTATCAG TTTATGGGGA AAGACAATGT GCCATTTCAC ACTGTGATGT TTCCTTCTAC CCAGCTTGGA ACTGGGGAAA ATTGGACATT GATGAAGACA GTCAGTGTGA CTGAATATTT GACATACCAA GGCGGAAAGT TCTCCAAGAG TAAAGGTGTT GGATTGTTTG GTAATGATGT AAAAGATACA AATATCCCTG TAGAAGTATG GAGATACTAC TTGCTGATCA ACAGGCCTGA GGTATCTGAC ACATCGTTTG AATGGGAAGA TTTGCAAGCA AAACTGAATG ACGAGTTGTT GAAAAACCTA GGCAATTTTG TTAATCGAGT TGTGAGTTTT ATAGCAAAGC CAGAAAATAT AGGTTATGGG TCTATCATTC CTGATGCTCC TGGTGCTGAA TCTCATCAAC TAACGATGTC ACTAAGTGAA AAGGTTGGGA AATTGGTGGA GGAGTATGTT GAAGCCATGG AAAAGGTTAA GCTCAAGCAG GGGCTGAAAA CTGCTATGCT CATTTCGGGT GAAGGGAACG CATACTTGCA GACCAGCGAA TTTTGGAAAC TTTACAAGGA AGATAAACCT TCCTGTGCAA TTGTTGTAAG AAGTGCTGCT GGTTTAGTAC ACCTTCTTGC ACGATTGTTA GAACCTTTCA TGCCATCTTT TTCTCATGAG GTATTCAAAC AGCTAAATTT GCCTCCACAT TTTTCACTCT CCGACGAAAG AGGAGAGGTA TTACAAGCAA GTAGACCTTG GGAGATTCTG CCTCCAAGCC ACAGGATAGG CACTCCTCAA CCATTGTTCA AGGAACTGAA AGATGAAGAA GTGCAACAGT ACAAAGCAAG GTTCGCTGGA AGTCAAGTCT GA 
Length1752
Protein Sequence
Protein Residue
Map Locationscaffold_1: 4100541.. 4103626
Download Sequence
A.thaliana
AGI-codeAT4G13780.1
Descriptionmethionine--tRNA ligase, putative / methionyl-tRNA synthetase, putative / MetRS, putative
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
33.4963 Ahg483920 Signal transduction histidine kinase
36.4966 Ahg937043 Polynucleotidyl transferase, ribonuclease H-like superfamily protein
51.4004 Ahg481945 LOB domain-containing protein 13
66.7233 Ahg479712 Domain of unknown function (DUF26)
68.5201 Ahg352898 glycosyl hydrolase 9B17
69.0217 Ahg923932 WAG 1
72.9931 Ahg494865 Pectin lyase-like superfamily protein
85.6505 Ahg482492 Predicted AT-hook DNA-binding family protein
88.1476 Ahg325399 MEI2 C-terminal RRM only like 2
97.242 Ahg316436 Pathogenesis-related thaumatin superfamily protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression