Detail



ID : Ahg312615

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|312615|fgenesh1_pm.C_scaffold_1001395
Sequence
ATGGATCCAA AGATGTTGTT TTGTTTACCA GAAGGAGATG CATTGTTTAA TCCACTCAAT ACAATGTTTA TTCAAATGGC TTGCATTCTC GTCTTCTCTC AATTCTTCTA CCTCTTCCTT AAACCCTGTG GCCAAGCCGG TCCCGTTGCC CAGATTCTCG CTGGGATTGT GTTGAGTTTG CTCACAATAA TCCGCAAAGT CCACGAGTTC TTCCTCCAGA AAGATTCAGC GAGCTATTAC ATCTTTTTCT CATTCGTTTT ACGAACATCT TTCATGTTCT TGATCGGTCT CGAGATCGAT CTTGACTTCA TAAAACGAAA CTTAAAGAAC TCCATTGTCA TAACTTTGGG CTCCTTACTC ACCTCTGGCA TCATCTGGCT CCCTTTCCTC TGGTTTATCA TCCATTTCAT GCAGATCAAA GGCGATTTCT TAACATTTTA CTTAGCCTTC CTCATTACCT TGTCCAACAC GGCAGCTCCT GTCGTCATCC GTTCGATCAT CGATTGGAAA CTCCACACAT CTGAGATCGG ACGGCTAGCA ATCTCATGTG GATTGTTCAT CGAGATAACC AACATATTTC TCTACACTAT CGTCCTTTCT TTCATCTCAG GGACTATGAC CGCCGATATT TTTATCTACA CATTTGCCAC CGGAGTTATA ATCTTGATTA ATAGATTCTT AGCTTCATGG CTCCCAAAAA GAAACCCTAA AGAGAAATAT CTCTCCAAAG CTGAAACGCT TGCTTTCTTC ATCATTATTC TAATCATCGC GTTAACCATT GAATCCAGCA ACTTAAACTC CACGCTTTTT GTGTTTTTCA TCGGATTAAT GTTTCCGAGA GAAGGAAAAA CTTACAGAAC GATGATCCAA CGGTTGAGTT ACCCGATTCA CGAGTTTGTT CTTCCGGTTT ACTTTGGTTA CATCGGGTTT AGATTTAGCG TGAATTCGTT AACCAAACGC CACTACCTCG TCCTTGCTAT GACAGTGGCT TTAAGCCTAC TGGGGAAGCT TCTAGGAGTT TTATGCGCTT GTTCATTCCT AAAGATCCCA AAGAAGTATT GGCTTTTCTT GTCAACTATG CTTTCCGTCA AAGGTCATAT AGGTCTTGTT CTTCTCGACT CTAACTTGAT TTACAAGAAA TGGTTTACTC CGGTAGTTCA TGATATGTTC GTTGCGGCTC TAGTGATCAT GACTTTGTTA AGCGGAGTTA TGACGTCTTT GTTGCTTAGA GTGCAAGAAA AGAGTTTCGC ACACATAAAA ACATCACTTG AGTTTTTTGA CACTAAAGAG GAGTTACGAG TGTTGACGTG CGTCTATGGT GTTCGTCATG CTCGTGGATC AATCTCTTTA GTCTCTGCTC TAAGTGGCTT CTCTCCTGGA GCTTCTTCTT CGCCGTTCAC GCCTTATCTT ATGCACCTCA TACCGCTCCC GAAGAAGCGG AAAACGGAAT TGTTGTACCA CGAATTAGAC GAAGATGGAG GAAATTCCAA CGGTGGAGAC GATGAGTTCG GGACTAATGA AGGACTAGAG ATCAATGACT CGATCGATTC GTTTACTAAA GACAGAAAAA TCATGATCCG GCAAGTGAAA CTCGTGGCAC CGATGGAGAC TATGCACGAA GAGATCTGTA ACGCGACTGA AGATCTTCGC GTCTCGATTG TGTTTCTTCC CTTTCATAAA CACCAGAGGA TCGACGGGAA AACCACCAAT GACGGGGAAG TTTTTCGACA TATGAACCGG AAGGTTCTAA AGCAAGCTCA GTGTTCGATA GGTATCTTTG TTGATAGAAA CATAACCGGG TTTCACCAGC TTCACGGCTC TGATTCGGTA CAACACGTTG CGGCGTTGTT CTTCGGTGGT CCTGATGACC GTGAGGCTCT GTCCTTGTGC AAGTGGCTTA CCAATAACTC TCAGATTCAC CTCACTGTAA TACAGTTTGT GGCCGATGAC TCAAAGATGG AGAAACTTGT TGGTGACGCG GTGACCAAGG AAAACAACGA AGTATTCTTG GAGATTGTTA GTAAAGATCA AACCGAAGAC GAAACAGATC GAATCTTCTT AGAAGAATTC TATAACAGAT TTGTGACGAC GGGGCAAGTT GGATTCATAG AGAAGCGAGT GAGCAACGGA GTGCAGACGC TGACAATTCT GAGAGAGATC GGGGAGATGT ATTCACTGTT TGTGGTAGGA AAAAACAGAG GAGATTGTCC AATGACTTCA GGAATGAACG ATTGGGAAGA GTGTCCGGAA TTAGGAACAG TCGGAGATTT CTTGGCTTCA TCAAATATGG ATGTAAATGC TTCTGTATTA GTAGTTCAAA GACATAGAAA CTCATTTGAT AGCTTTGTAG ATGATTAG 
Length2358
Protein Sequence
Protein Residue
Map Locationscaffold_1: 6546200.. 6548982
Download Sequence
A.thaliana
AGI-codeAT1G16380.1
DescriptionCation/hydrogen exchanger family protein
TAIR curator summarymember of Putative Na+/H+ antiporter family
Alias[ATCHX1][CHX1][CATION EXCHANGER 1]
Gene coexpression
MR
MR Locus Description
24.9199 Ahg359234
30 Ahg923518
61.7414 Ahg477911 NOD26-like intrinsic protein 7;1
61.9677 Ahg493979 AGAMOUS-like 75
71.5821 Ahg921360
77.6531 Ahg891825
81.1665 Ahg911832
83.7854 Ahg471762 F-box family protein
84.5695 Ahg320775 GDSL-like Lipase/Acylhydrolase family protein
84.8882 Ahg921700 ENTH/VHS/GAT family protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression