| Annotation |
|---|
| Description | jgi|Araly1|313173|fgenesh1_pm.C_scaffold_1001953 |
| Sequence |
ATGTTTGATC GCCGACGCAC GGGAGGGAGA GATGGCAACA CAAGGCTTCG TGGAGAATTA ATGGCCGCTC CTCCTTCTCT TCTCGGATCC TTTGAAATCG ATTCTCTTCA AGTCTTGATC AATTCAAAGC TTTGGTTCCT ATCTTCGAGA TCTTTCTTCT CTATTTCTAC TACCAACAAC AACAACAATA ACCTCTCACG CTTCCTCTTT CGATTCTCTA CTCTTCCTCA TTGCGCTGCG TCTTCTTCTT CTTCCTCCAA TCTCGAGTCT TATTACGCTA ATCTCATTTT GAGCTCTCAC GGAGATAATC AACCTAATCG GAAGTGGTCT TCTCATCAGT TTCGTCTCCT CTTGACTGAT CCAGATTTGC TTATTAGAGT CCTTAATATG ATTCGGGTAA AGCCCGAAAT CGCTTTTCGG TTTTTCAATT GGATACAAAG GCAGAGCGAT GTGAAGCAGT CACGGCAAGC TTTTGCTGCG ATGTTGGAGA TTTTAGCTGA GAATGATTTG ATGAGTGAAG CTTATTTGGT TGCTGAGAGG AGTATCAATC TTGGTATGCA CGAAATTGAT GATCTTTTGA TTGATGGGAA CTTTGATAAG TTGGTTGCTC TCAAGCTTTT AGATCTGTTG TTGTGGGTTT ACACTAAGAA ATCTATGGCG GAGAAGTGTT TGTTGAGTTT TGAGAAGATG ATTAGGAAAG GTTTTTTACC TAGTGTTAGA AATTGTAACA TAGTTTTGAG GGTTCTTAGG GATTCAAGGA TGATGAATAA GGCTCAAGAG GTCTATGAGA CGATGGTTAT GCATGGTATT ATGCCGACGG TTATCACGTT TAATACTATG TTGGATTCTT GTTTCAAGGC TGGTGATTTG GAGCGAGTCG ACAAGATTTG GTTAGAGATG AAGAGAAGAA ATATTGAATT TAGTGAGGTG ACTTACAATA TACTGATCAA TGGGTTTTCC AAGAATGGTA AAATGGAGGA AGCTAGGCGG TTTCATGGAG ATATGCAAAG ATCTGGGTTC CCTGTTACAC CTTACTCGTT TAATCCGTTG ATTGAAGGGT ATTGCAAGCA AGGTTTGTTT GATGAAGCTT GGGGAGTTAC AGACGAGATG CTCAATGCGG GTATTTATCC AACCACATCC ACGTATAATA TTTATATACG TGCTCTCTGC GAGTTTGGAA GAATAGATGA TGCCAGAGAG CTGTTATCTA GTATGGCTGC TCCTGATGTT GTGTCTTATA ACACTCTAAT GCATGGATAC ATCAAGATGC GGAAGTTTGT AGAGGCTTCT CTCTTGTTTG ATGACTTGAA AGCTGGGAAT ATCAATCCCA GTATTGTCAC CTATAATACT GTAATAGATG GTCTTTGTGA GTCAGGGAAC TTGGAAGGTG CTCAGCGGTT AAAAGAAGAG ATGACCAGCC AACTGATATT TCCTGATGTG ATTACGTACA CGACTCTTTT AAAAGGATTT GTTAAGAATG GGAATCTTTC CATGGCTACT GAAATTTATG ATGAGATGCT GAGGAAAGGA ATTAAACCTG ATGGATATGC ATACACTACA AGGACTGTGG GTGAATTGCG GCTTGGAGAT TCAGAAAAAG CATTTCGTCT GCACGAAGAG ATGGTGGCAG AGGATCATCA TGCTCCAGAT CTGACCATCT ATAACGTTCG TATAGATGGA CTCTGCAAGG TTGGGAATCT TGAAAAAGCA ATTGAGTTTC AGCGTAAGAT TTTTAGAGTT GGTCTTGTCC CAGATCATGT TACTTACACC ACGGTTATTC GCGGTTATTT GGAGAAGGGC CGGTTTAAGA TGGCTAGAGA CTTGTATGAT GAAATGCTGA GTAAAAGGTT ATCTCCCTCT GTGATTACCT ACTTTGTGTT GATTCATGGT CATGCGAAAG CAGGAAGGCT AGAACAAGCC TTTCAGTATT CCACCGAGAT GAAAAAGAGA GGCGTTCGTC CAAATGTCAT GACGCACAAT GCTCTTTTAC ATGGCATGTG CAAAGCTGGT AATATAGATG AAGCTTACAG ATACTTGTGC AAGATGGAAG AAGAGGGGAT TTCACCAAAT AAATATAGCT ACACTATTCT TATAAGCAAG AACGGTGATC TCGATAAATG GGAAGAGGTT GTTAAATTGT ATAAAGAGAT GCTAGATAAA GAGATTGAGC CAGATGGTTA CACACATAAA GCCTTGTTCA AACATTTGGA GAAAGACCAC GAATCTATGG CTCTCGATTC TTCCGGAAAA CAACCTGAGC AGCAACAACA ACCGCGAGGG TCCTCTAGAA ACGGCGAAGC AAGATTGAAA CTTCGGAGAA CCCCAAATGA AGAACATGAG CCTGAGAACT ATGAAGATCT ACCTTTGGAC TATAGCCCTT CTCTGTTTAG CTCTCTTGAG CGTTACTTAC CTGAGCAGCT TCTCAATTCC ACACGAATCG ATAAAGCTAG TTTCATGAGA GACCTTCTTC TCCGATATTC CCCTGATACT GAGCGAGTTC GGGTTCTGAG GCATAAAGAA TACAGAGACA AAATCATGTC TTCTTACCAA CGTAAGCATG GAGAGATCTA TACTCTTGAC CCTACTAGTT TCTTTACGCC ATCGTTTCTT AGAGCTTTTA GTGGGAAGTC AGAGCCGAAT TTCAGAAATA TTATGGTTGA ATCTTATCCT GGGATTTTCA CTTTTGAAAT GTTTAAACCA CGGTTTTGTG AAATGTTACT AGCAGAGGTT GAACATATGG AGAAATGGGT TTATGATTCA AGATCCACAA TAATGAGACC TAATACGATG AACAATTTTG GTGTTGTCCT TGATGATTTT GGCTTTGATA GCATGCTTCA GAAGTTGGTT GATGACTTTA TTAATTTTGG TTATTGTTGC AAGTTTGTTT TTTGTGATAT ATTTGCTGAT GGGCTTAGTT CAAATCTTGT GTCAGTTCTG TTCCCGGAAG TCTGTGGATC CTCTTTAGAT TCTCACCATG GCTATATTGT TGAATATGGA AAAGATAGGG ATGTTGATCT TGGGTTCCAT GTGGATGACT CTGAGGTTAG TTTGAATGTC TGCTTGGGCA AACAGTTTTC TGGTGGGGAG CTGTATTTTC GAGGTGTGAG ATGTGATAAG CATGTGAATT CCGATAGCAC TGAAAAGGAA GTTTATGATT ACTCTCATGT ACCTGGTCAT GCCATTCTTC ATCGTGGACG TCATCGCCAT GGTGCTAGAG CTACAACTTC TGGACACCGA GTCAACTTGA TTTTGTGGTG TAGAAGCTCA ACTTTTCGAG AGATGAAGAA TTATCAGAGA GATTTCTCGA ATTGGTGCGG AGGATGCAAA CTTGAGAAAC AGAGAAGGCA GCGTGATTCG ATTAATGCAA CTAAAGAGAT ACTGGCTAGG AAAGCTGCAG AGAAGACACT TGTTGAGCTG GCTTCAAAAT CATGTGCCGA CTAA |
| Length | 3444 |
| Protein Sequence | |
| Protein Residue | |
| Map Location | scaffold_1: 9641957.. 9647122 |
| Download Sequence |
|
| A.thaliana |
|---|
| AGI-code | AT1G22960.1 |
| Description | Pentatricopeptide repeat (PPR) superfamily protein |
| TAIR curator summary | |
| Alias | |
| Gene coexpression |
|---|
| MR |
| MR | Locus | Description |
| 6.32456 |
Ahg483691 | WD-40 repeat family protein / beige-related |
| 9.79796 |
Ahg317994 | KH domain-containing protein / zinc finger (CCCH type) family protein |
| 11.7473 |
Ahg486183 | AGAMOUS-like 18 |
| 15.6844 |
Ahg485847 | SNF2 domain-containing protein / helicase domain-containing protein / F-box family protein |
| 16.2481 |
Ahg334090 | tyrosylprotein sulfotransferase |
| 18.4932 |
Ahg921968 | Transducin/WD40 repeat-like superfamily protein |
| 20.4939 |
Ahg490389 | methyltransferases |
| 22.9129 |
Ahg487657 | Tudor/PWWP/MBT domain-containing protein |
| 23.4094 |
Ahg483124 | PRP38 family protein |
| 30 |
Ahg477715 | Signal transduction histidine kinase, hybrid-type, ethylene sensor |
|
| RNA-seq |
|---|
Seasonal expression (July 2011 to June 2013) |
|
|
| The four seasons |
|
|
| Growth Chamber expression |
|
|