Detail



ID : Ahg313461

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|313461|fgenesh1_pm.C_scaffold_1002241
Sequence
ATGGAGCGAT TTTTGATATT GCCGTTTTCG TTAGGGTGTT CTACGCAATC TTGCGTCGCT GTGGCCACTA CTCATCAACA CAAGAAACCA AACCAACTCA TCAAGAGAAG AGAGGAAGGT GATGAGAATG GCTCATTTAA AAAAGAATAC ACAAAGATGG ACAATAGCAG TGCAAATATC TCAGATGGAA GAGTAGAAAG TGATGAAAAT GGCTCATTTA AAAAAGACTA CACAAAGATG GACAACAACA ACAACAACAA TGGTGCTAAT ATCTCAGATG GTATCTACAG AATTATACGA AGCTTCAAGA GTTTCTCTCA CTTTTTCATT CGTTACGAAG AGGAAACGAA AGAGAGAGAG GCGGAGATTG AGATAGGATA TCCGACGGAG GTGAAGCACT TGAGCCACAT CGGAGTTGAT GGAACGATGA CCACTTTTGA CAAGTCCTCC TCATCTTTTC CATTCGCCGG CTTTCATCTC ACGGCCGTCT GA 
Length492
Protein Sequence
Protein Residue
Map Locationscaffold_1: 11387201.. 11388350
Download Sequence
A.thaliana
AGI-codeAT1G27380.2
DescriptionROP-interactive CRIB motif-containing protein 2
TAIR curator summaryencodes a member of a novel protein family that contains contain a CRIB (for Cdc42/Rac-interactive binding) motif required for their specific interaction with GTP-bound Rop1 (plant-specific Rho GTPase). Interacts with Rop1 and is involved in pollen tube growth and function. Protein most similar to RIC4 (family subgroup V). Gene is expressed in all tissues examined.
Alias[RIC2][ROP-interactive CRIB motif-containing protein 2]
Gene coexpression
MR
MR Locus Description
13.3041 Ahg949467
13.9284 Ahg942782 P-loop containing nucleoside triphosphate hydrolases superfamily protein
21.2368 Ahg470474 Protein of unknown function, DUF593
23.4521 Ahg946181 low-molecular-weight cysteine-rich 38
29.1548 Ahg942957 Disease resistance-responsive (dirigent-like protein) family protein
34.641 Ahg473968 Expressed protein
36.2491 Ahg479173 Pectin lyase-like superfamily protein
51.7107 Ahg912288
55.0727 Ahg920639
59.1946 Ahg894988
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression