| Annotation |
|---|
| Description | jgi|Araly1|313927|fgenesh1_pm.C_scaffold_1002707 |
| Sequence |
ATGGAGATGC TGAATTTTTA CAAGTTAAAG GGAAAACCTA TGAGGATAAT GTTTTCAGAA CGTGATCCTA GCAAGAGGTT GAGCGGCAGA GGTAACGTGT TTGTCAAGAA TCTAGACGAA TCTATCGACA ACAAGCAACT TAGCGACATG TTCTCTGCAT TTGGCAAAGT TCTCTCTTGC AAAGTGGTTC GTGATGCTTC TGGAGTTTCG AAAGGATATG GGTTCGTCCA GTTTTACTCA GAGCTTTCAG TCAATATCGC ATGCAATGTT CGCAATGGCA CGCTCATCCG CAATCAACAT ATTCACGTTT CTCCATTCGT TAGCCGTCGT CAATGGGATG AATCTCGGGT TTTCACTAAT GTTTATGTCA AAAACTTGGC GGAGACTACG ACAGATGATG ATTTGAAGAT GATTTTTGAA GAGTTTGGAG AGATTACTAG TGCGGTGGTG ATGAAAGACA AAGAAGGTAA GTCTAGAATG TTCGGGTTTG TGAACTTCGA GAAGGCTGAG GCCGCGGTTA CTGCAATAGA CAAGATGAAC GGGATAGTAG TTGATGAAAA AGAGTTGCAT GTTGGGAGGG CTCAGAGGAA AAAGAATAGA ATTCAAGATT TGAAAGTCAT TTTTAAACTA GAAAAGATAA AACGGGATAT GAAAACACGT AAAGGGACGA ATCTTTATGT GAAGAATCTT GATTATTCTG TTGATAACAC AAAGCTTCAA GAATTGTTCT CAGAGTTTGG AACTATCATT TCCTGCAAGG TCATGGTCCA TCCCAATCGT ATTAGCAAAG GTGTTGGGTT TGTTGAGTTT TCAACGAGCG AAGAAGCTTC TAAAGCTATG CTTAAGATGA ATGGGAAAGT GGTGGGAAAT AAACCAATCT ATGTTTCTTT GGCCCAATGT AAAGAGGAAC ATAAGCTTCA TTTACATACT CAATTTAATA ACCTTCCCTG GAACGTTGTT TCGTCAACTA TAGCACCAAG TCCTCACCAA CACCCTATCT TCAGTCAAGC TTGGCCTCCA ATGTCTATCC CTAATACCAT GCAAAGAGTA TACAACTTTC AATCGTATTT TATGTGCGGA TCAAGAATGT CAAACAGTTG CCCTCCAATG TCTATGCCTA ATTTCATGGT ACCACAACCA TTTCGTCCAA CAATATACCC ACATGCTCCT CCTGTCGGCC TCCACTATGG TTTTCCACTC CCACTACTAT AA |
| Length | 1212 |
| Protein Sequence | |
| Protein Residue | |
| Map Location | scaffold_1: 15151064.. 15156093 |
| Download Sequence |
|
| A.thaliana |
|---|
| AGI-code | AT1G34140.1 |
| Description | poly(A) binding protein 1 |
| TAIR curator summary | polyadenylate-binding protein, putative / PABP, putative, non-consensus splice donor TA at exon 1; similar to polyadenylate-binding protein (poly(A)-binding protein) from (Triticum aestivum) GI:1737492, (Nicotiana tabacum) GI:7673355, {Arabidopsis thaliana} SP:P42731; contains InterPro entry IPR000504: RNA-binding region RNP-1 (RNA recognition motif) (RRM). Only member of the class IV PABP family. |
| Alias | [PAB1][poly(A) binding protein 1] |
| Gene coexpression |
|---|
| MR |
| MR | Locus | Description |
| 19.2873 |
Ahg481945 | LOB domain-containing protein 13 |
| 26.8328 |
Ahg942653 | sulphate transporter 1;1 |
| 31.6228 |
Ahg358371 | Pectin lyase-like superfamily protein |
| 34.5977 |
Ahg475938 | Zinc finger C-x8-C-x5-C-x3-H type family protein |
| 35.4965 |
Ahg334132 | Aluminium activated malate transporter family protein |
| 36.0278 |
Ahg315021 | Polyketide cyclase/dehydrase and lipid transport superfamily protein |
| 36.2629 |
Ahg331183 | |
| 44.8888 |
Ahg951224 | |
| 45.607 |
Ahg911918 | F-box family protein |
| 52.9906 |
Ahg323966 | |
|
| RNA-seq |
|---|
Seasonal expression (July 2011 to June 2013) |
|
|
| The four seasons |
|
|
| Growth Chamber expression |
|
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