Detail



ID : Ahg358371

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|358371|fgenesh1_pg.C_scaffold_8002158
Sequence
ATGGGATACA ATTATGTGTC CCTCATAGTA ACAATCCTGC TCGTGGTGAT TACATCGCCC GTGGTTTTCG GTAACGATGC AGCACCAATT CCGGAGAACA AAGGCCGAAT CGAGCAGTGG TTCAACACCA ACGTGAAACA AAATGGAAGA GGCCATTTCA AGACAATAAC CGAAGCAATA AACAGTGTAC GGGCAGGGAA CACTAGGCGT GTGATAATCA AGATAGGTCC TGGTGTATAC AAAGAGAAGG TCACGATAGA TAGAAACAAG CCCTTCATCA CACTTTATGG TCATCCAAAT GCAATGCCCG TATTGACATT CGATGGTACC GCAGCACAAT ATGGGACAGT TGATAGCGCA ACTCTCATTG TCTTGTCAGA CTATTTCATG GCTGTTAACA TCATCGTTAA GAATTCTGCC CCTATGCCGG ATGGTAAGAG GAAGGGAGCA CAAGCTTTAT CTATGAGAAT CTCTGGCAAC AAAGCAGCTT TCTACAACTG TAAATTTTAC GGTTATCAAG ACACGATTTG TGATGACACC GGAAACCATT TCTTCAAAGA CTGCTACATC GAAGGCACAT TTGATTTCAT CTTTGGAAGT GGACGCTCTC TATACCTCGG TACACAACTA AACGTTGTGG GAGATGGAAT CAGAGTGATC ACAGCTCATG CGGGAAAAAG CGCAGCAGAG AAAAGTGGAT ACTCATTCGT GCACTGCAAG GTTACAGGGA CTGGAACCGG GATCTACTTG GGTCGAGCAT GGATGAGCCA CCCAAAGGTT GTTTATGCAT ACACTGATAT GTCAAGTGTC GTGAACCCAT CCGGATGGCA AGAAAATCGC GAGGCCGGAC GTGACAAGAC GGTGTTCTAT GGAGAATATA AGTGCACAGG AACAGGATCG CACAAGGAGA AGAGAGTGAA GTATACACAA GACATTGACG ACGTAGAAGC TAAGTACTTC ATCTCGCTTG GCTACATCCA AGGATCTAGC TGGCTCCTGC CTCCTCCCTC TTTCTAA 
Length1017
Protein Sequence
Protein Residue
Map Locationscaffold_8: 18919125.. 18920677
Download Sequence
A.thaliana
AGI-codeAT5G61680.1
DescriptionPectin lyase-like superfamily protein
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
4.24264 Ahg352619
4.69042 Ahg487573 Pectin lyase-like superfamily protein
4.89898 Ahg470425 Protein of unknown function (DUF810)
5.09902 Ahg334275 oligopeptide transporter 2
5.65685 Ahg494865 Pectin lyase-like superfamily protein
5.83095 Ahg478121 Pectin lyase-like superfamily protein
6.16441 Ahg492665 root hair specific 14
6.48074 Ahg912947 Polyketide cyclase/dehydrase and lipid transport superfamily protein
6.85565 Ahg351609 Protein of Unknown Function (DUF239)
7.48331 Ahg481945 LOB domain-containing protein 13
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression