Detail



ID : Ahg314252

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|314252|fgenesh1_pm.C_scaffold_1003032
Sequence
ATGGCAACAG TAAAAGAGGA CCATTGTGAG GATTCTCTTA CTTATATGGG TTTTGCTCTG CACCAGGCTA AACTTGCTCT GGAGGCACTT GAAGTTCCTG TTGGATGTGT TCTTCTTGAG GATGGTAAGG TCATTGCTTC AGGGCGAAAC CGAACAAATG AGACACGCAA TGCCACAAGA CATGCTGAGA TGGAAGCAAT TGATCAACTT GTCGGACAGT GGCAGGAAGA TGGACTCTCA CCTTCACAAG TCGCTGAGAA ATTCTCGAAA TGCATTCTTT ACGTAACATG TGAACCTTGC ATAATGTGTG CATCGGCCTT ATCGTTTCTC GGTATAAAGG AAGTGTATTA TGGATGTCCA AATGATAAAT TTGGGGGATG TGGTTCCATT TTGTCGCTTC ACTTGGGCAG TTCTCAGTCG TCAGATATCA TTGAGGAAGC TCAAAGAGGA AAAGGGTATA AATGCAGAGG AGGAATAATG GCAGAAGAAG CTGTCTCTCT TTTCAAATGT TTCTATGAGC AAGGCAATCC CAACGCCCCA AAGCCACACC GCCCTGTAGT TCAAAGAGAG AGGACTTGA 
Length579
Protein Sequence
Protein Residue
Map Locationscaffold_1: 23361016.. 23362212
Download Sequence
A.thaliana
AGI-codeAT1G48175.1
DescriptionCytidine/deoxycytidylate deaminase family protein
TAIR curator summary
Alias[emb2191][TAD1][embryo defective 2191][tRNA adenosine deaminase 1]
Gene coexpression
MR
MR Locus Description
3.74166 Ahg941896 DNA binding;DNA-directed RNA polymerases
18.412 Ahg470934 MALE GAMETOPHYTE DEFECTIVE 2
38.3145 Ahg358320 leo1-like family protein
41.6653 Ahg482617 Family of unknown function (DUF662)
44.1814 Ahg481908 alternative NAD(P)H dehydrogenase 2
52.1153 Ahg927405 magnesium transporter 1
54.3599 Ahg932839 Protein of unknown function (DUF295)
65.0615 Ahg923861
65.7647 Ahg943577
69.1954 Ahg329122 zinc finger WD40 repeat protein 1
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression