Detail



ID : Ahg314348

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|314348|fgenesh1_pm.C_scaffold_1003128
Sequence
ATGGCGGAGG GGCAATCCCC GGAGAACTCA CCGCCGGCTC CTCCTCCTCC TTCTCCTCCG TCACCTCCCT CTTCCAACGA TCAACAAACA ACATCTCCTC CTCCTTCCGA AAATCAAGAA ACAACATCTC CTCCTCCTCC ATCTTCCCCT GACCTAGCTC CTCCACCTCA ACAACAACAA GAATCACCAC CTCCTCCTTC GCCGGATAAT TCCTTCGATG GTTCTTCCTT GTCGCCTCCA CCACCACTGT CTGACTCATC CTCCTCCTCA CAATCACAAT CTCCACCTCC TCCTTCACCC TCCCCGCCTC AGCACAGTGA CAACAATGGC AACAAAGGAA ACAACAACGA AAACAACAAT GGAAATGATG GAAGCAACGG TGATGGAGGA AACAAGAACA CTTCTCATAC TCCTCCACCA GCGTCTAAGA CTTCGGACCA TAGCTCTCAG TCGCCACCAA AATCGCTGGC GCCACCTACA AGCAACGGTG GCTCGAATTC GTCAAGTAAT GATGGTCTGA ACATCGGTGC TGTTATAGGA CTTGTGGCGG CAGCTGGGCT TTTGTTCATC GTCATGATCT TGTTATGTGT CTGTTGTTTT CGGAAGAAGA AGAAGAAATC AAAGCTTGAC CAGATGCCGT ACTACGGAAG CAATGCTTAC GCCGCAGGCA AAACTGGGGG TGATCAATAC TACAACCAAA AAGTTGCAAC ACAACAACAC TACAACCAAA ATGATCACAT TGTGAATCTG CCTCCACCTC CTGGATCAAT GGGAACAAAC TGTGTAAATT CACCGCCTCA ACCACCACCT GCAGGAAATT GGCAGCCAAT GCCCTCGCCA CCAGCACCAG TGTCTGGAGG CGCAAATGTG ATCCATAGCG GCGAAATGAG CTCAAATTTC TCATCAGGTC CATACGCTCC ATCTCTACCA CCGCCTCACC CTTCAGTGGC TATGGGATTT AACAACAGCA CATTCACTTA CGAGGAGCTT GCAGCCGCAA CTCAAGGTTT CTCAAAAGAT CGCTTGTTGG GACAAGGCGG GTTTGGATAT GTTCACAAAG GAATATTGCC AAACGGTAAG GAGATCGCGG TGAAGAGCCT AAAAGCCGGA AGCGGGCAAG GTGAGAGAGA GTTCCAGGCA GAGGTTGAGA TCATCAGCCG CGTTCATCAT AGACATCTTG TGTCTCTTGT CGGATACTGC AGTAATGAGG GAGGACAGAG GTTGTTGGTC TATGAGTTTC TCCCTAATGA CACACTTGAG TTCCACCTTC ATGGGAAAAG TGGGACTGTG ATGGATTGGC CAACGAGAAT CAAGATTGCC TTAGGATCAG CAAAAGGTCT TGCTTATCTA CATGAAGATT GTCATCCAAA AATCATCCAT AGAGACATTA AAGCTTCAAA CATTCTCCTT GACCATAACT TCGAAGCCAA GGTTGCAGAT TTTGGTTTGG CCAAACTCTC TCAAGACAAC TATACACATG TATCGACTCG TGTTATGGGA ACATTCGGAT ACTTAGCTCC TGAATATGCA TCAAGCGGGA AACTAACAGA GAAATCAGAT GTTTTCTCTT TTGGAGTTAT GCTTCTTGAG CTCATAACCG GACGCAGACC GGTTGATCTT AGTGGCGACA TGGAAGACAG TTTAGTTGAT TGGGCGAGAC CATTATGCAT GAGCGCAGCT CAAGATGGAG AATATGGGGA ATTGGTGGAC CCATTCCTTG AGAACCAATA CGAGCCTTAT GAGATGGCAC GCATGGTGGC TTGTGCTGCT GCAGCCGTAA GACATTCTGG TCGTCGCCGC CCAAAGATGA GTCAGATTGT TAGGACGTTG GAGGGTGATG CCTCGCTGGA TGACTTAGAC GATAGTGTAA AACCGAGACA GAGTTCAAGC GGAGGTGAAG GCAGCTCAGA CTATGAGATG GGCACATATG GTGCCGAGAT GAGGAAGTTT CGGAAAGTGA CATTGGACAG TCGGGATTAC GGGGCAAGTA GCGAATACGG CGCCACAAGC GAGTATGGGC TTGACCCGTC CTCTTCAAGC AGCGAGGAGA TGCACATTGG AGGAAGCACC CGCAAAACTA CTACCACTAA CCGTGGGATT TAA 
Length2103
Protein Sequence
Protein Residue
Map Locationscaffold_1: 24126908.. 24130036
Download Sequence
A.thaliana
AGI-codeAT1G49270.1
DescriptionProtein kinase superfamily protein
TAIR curator summary
Alias[AtPERK7][PERK7][proline-rich extensin-like receptor kinase 7]
Gene coexpression
MR
MR Locus Description
10.3441 Ahg934600 MATE efflux family protein
11 Ahg351609 Protein of Unknown Function (DUF239)
11.6189 Ahg481945 LOB domain-containing protein 13
12.7671 Ahg495089 Xanthine/uracil permease family protein
13.0767 Ahg942510 transposable element gene
13.2665 Ahg925744
17.7764 Ahg338146 KNOX/ELK homeobox transcription factor
18.6815 Ahg492478 Heavy metal transport/detoxification superfamily protein
19.2873 Ahg478320 GDSL-like Lipase/Acylhydrolase superfamily protein
22.0907 Ahg342636 AP2/B3-like transcriptional factor family protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression