| Annotation |
|---|
| Description | jgi|Araly1|314697|fgenesh1_pm.C_scaffold_1003477 |
| Sequence |
ATGGATTCTG TGAACTCCTT CAAAGGATAT GGAAAAGTTA ACGAAGCTGA AGATTTAGCA TTGAAGAAAA AAACAAGAAA ACGTCTACTT CTGCTATCCA TCTCCGTCGT AGTTCTCATC GCCGTAATAA TCGCCGCCGT AGTCGCCACC GTCGTTCACA AAAAGAATAA CGAGTCAACA CCGAGTTCAC CTCCCGAGTT AACACCATCC ACTTCACTCA AAGCCATTTG CAGCGTAACT CGTTTCCCTG AATCTTGCAT TTCAAGTATC TCAAAGCTTC CATCTTCCAA CACATCAGAT CCAGAGACTC TGTTTAAGCT CTCATTGAAA GTAATCATCG ATGAGCTCGA TTCGATTTCC GATTTACCGG AAAAGCTATC GAAAGAGACA GAAGACGAAA GAATCAAATC TGCGTTAAGG GTTTGTGGAG ATCTAATCGA AGATGCTTTA GATCGGCTCA ACGACACTGT TTCCGCCATT GATGACGAAG GAAAGAAGAA AACTTTGTCA TCTTCCAAAA TCGAAGATCT CAAAACTTGG CTAAGCGCAA CGGTAACAGA TCACGACACG TGTTTCGATA CGTTAGACGA GTTAAAACAG AACAAAACAG AGTATGCGAA CTCGACGATC ACTCAGAATC TGAAATCGGC AATGAGTAGA TCAACAGAGT TCACTAGCAA CAGTCTTGCA ATTGTATCGA AGATTCTTGC TGCGTTAAGC GATTTGGGGA TTCCGATTCA CAGGAGAAGA AGACTGATGA GTCATCATCA GCAAAGTGTG GATTTTGAGG ATTGGGCACG GCGGAGGTTG TTGCAGACGG AGAGTTTGAA GCCTAATGTG ACGGTGGCGA GTGATGGAAC CGGTGATGTG TTGACGGTGA ATGAAGCGGT GGCGATGGTG CCGAAGAAGA GTTTGAAGAT GTTTGTGATA TATGTGAAGA GTGGAACTTA TAAAGAGAAT GTTGTGATGG ATAAGAGTAA ATGGAATGTT ATGATTTACG GTGACGGCAA AGGAAAGACC ATTATTTCCG GCGGTAAGAA CTTCGTCGAC GGGACTCCTA CTTACGAAAC GGCGACGTTT GCTATACAAG GCAAAGGATT TATAATGAAG GATATTGGAA TCATAAACAC CGCCGGAGCA ACGAAACATC AGGCGGTAGC ATTCCGATCA GGGTCCGATT TCTCAGTCTA TTACCAATGC TCCTTCGACG GTTTTCAAGA CACTCTTTAC CCTCACTCCA ACCGGCAATT CTACCGTGAC TGCGACGTTA CCGGAACAAT CGACTTCATT TTTGGAAGTG CCGCCGTCGT TTTCCAAGGC TGCAAAATCA TGCCACGGCA GCCTCTTCCT AACCAATTCA ACACCATAAC CGCTCAGGGC AAAAAAGATC CGAATCAAAA CTCCGGGATG TCGATCCAGC GATGCACTAT CTCCGCAAAT GGCAATGTGA TTGCTCCCAC GTATCTTGGC CGGCCGTGGA AGGATTTTTC CACGACTGTA ATTATGGAAA CTGAGATTGG ACCGGTGGTT AGACCGTCCG GGTGGATGTC ATGGGTTTCC GGAGTTGATC CACCAGCAAG TATTGTGTAC GGAGAGTATA AGAATACGGG TCCGGGGTCG GATGTAACCA AGAGAGTTAA ATGGGCCGGA TATAAATCGG TTATGTCGGA CGCTGAGGCT GCGAAGTTTA CGGTGGCCAC GCTTTTACAT GGAGGTGATT GGATACCGGC GACAGGAGTG ACGCATCAAC TATCTTAA |
| Length | 1758 |
| Protein Sequence | |
| Protein Residue | |
| Map Location | scaffold_1: 27414839.. 27416784 |
| Download Sequence |
|
| A.thaliana |
|---|
| AGI-code | AT1G53840.1 |
| Description | pectin methylesterase 1 |
| TAIR curator summary | encodes a pectin methylesterase |
| Alias | [ATPME1][PME1][pectin methylesterase 1] |
| Gene coexpression |
|---|
| MR |
| MR | Locus | Description |
| 12.083 |
Ahg471076 | Eukaryotic aspartyl protease family protein |
| 14.7986 |
Ahg496502 | Pectin lyase-like superfamily protein |
| 15.0997 |
Ahg492364 | Pectin lyase-like superfamily protein |
| 16.9706 |
Ahg472386 | |
| 18.3303 |
Ahg943148 | Cupredoxin superfamily protein |
| 18.9737 |
Ahg472083 | |
| 20.3961 |
Ahg331018 | Plant protein of unknown function (DUF828) with plant pleckstrin homology-like region |
| 21.4942 |
Ahg929671 | |
| 22.8035 |
Ahg930029 | Leucine-rich repeat (LRR) family protein |
| 23.4307 |
Ahg948737 | HAD superfamily, subfamily IIIB acid phosphatase |
|
| RNA-seq |
|---|
Seasonal expression (July 2011 to June 2013) |
|
|
| The four seasons |
|
|
| Growth Chamber expression |
|
|