Detail



ID : Ahg314794

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|314794|fgenesh1_pm.C_scaffold_1003574
Sequence
ATGTTTTCAT CTTCGATTAG GTTAATCGTA TCTGGATCCC ACCGGACTCA AACCCTAAAA TCGCCGTCAA ATTCTCCGAG CGTCTTCATC TCCGTACCTA AATTCTTTAA CTCTGAGTCA AATTCGACGG GAACCGGTTC AAGATCCGTA GCGATGAGCA GCGTTGACAA AACCGGGTCG GATTCAGGAG CAATCGAGAA TCGAGCGGGC AGGATGAGAG AGAAGCTTCA AAAAGAGCTC GAACCAGTGG AGCTAGTGAT CGAAGATGTT TCGTATCAGC ACGCAGGTCA CGCCGGAATG AAAGGTAGAA CCGACGGAGA GACGCATTTT AATGTGAAGA TCGTTTCTAA AGGATTCCGA GGAATGAATC TGGTGAAGAG ACACAGAGAC GATGATGAAC ACGTATGGCT CAAACACTAT TCATCCAAGC ATCAGATACT TCTAGTAGGC GAAGGAGATT TCTCCTTCTC TTGCAGCTTA GCCACTTGCT TCGGCTCTGC TTCCAATATC TACGCTTCCT CTCTCGATTC ATTCGATTAT AAACCTGTTG ACAAAGGTTG TAGCTTTATG TTTGATTTCC TCAGTTGTTG CATGTCTTTT ATGGTAATTG AAGCAGATGA TGTTGTTAGA AAGTACAAGA AGGCAAGATC AAATCTTGAA ACTTTGAAGA GACTTGGAGC TTTCCTTTTA CATGGAGTTG ATGCTACCAA ACTGCTACTC CATCCTGATC TTCATTATAG AAGATTTGAT CGTGTCATCT TCAACTTCCC GCACACCGGT TTCCATGGCA AAGAGTCTGA TCCCTGTCAA ATACACTGCT GCAACTTTGG GAATGTTTTA AAAGATTTAT TACATATTCT TTGTCTCCAT ATGCTAAGAG CTGATGGAGA AGTTCATGTC TCTCACAAAA ACAAAGCACC TTTTTGTCAT TGGAATCTTG AGGAGCTCGC TAGCAGATGC TTTCTTGTGT TGATTCAACG TGTGGCATTC GAGAAGAGAA ATTACCCAGG TTATGAGAAT AAGAGGGGAG ATGGGTCTAG ATGTGACCAA CCTTTTCTTT TGGGAGAGTG CAGTACTTTC AAGTTCAAAT TCTCTCTCGT GGCTAAAGAG CTTTATGCAG AGAAGGTGAA ATGGAGAGAA GAGAAGGAAG GAGAATCAAA GTATCCCCAA GATTTATCAA CTCGGGGGAT GAATAACAAA CATGCCCGTT TTGAAGATAG CTCGATACAT CTTGAATTGC CCAGATGCAC TGAAAGAACA AAACATCATC TTTCTCTTGA AATGCATAAT GGAGAATTAC AGAAAGCGGT AACACGGACG AGCTTTCCTC GTGAGTACAC TAAAGAATCA CAAGAAAGAT GCCGCCTACT TTGTCAAGAC TTTGCAGTAC AAGCTAGTCA AGAACCGTTC CCCAAACGCT CTCTCCGCTT CAGTGGAGTT TCTCATGGAA TTCATAACGG GAGAGTACGA AAAATGTTGA TACGGAACAG CACTGGAGAA TCACGAAAAC GAAGGATGAG GAGGCAGAGG AACCTTAAAA TCAGGTAA 
Length1548
Protein Sequence
Protein Residue
Map Locationscaffold_1: 28045335.. 28048067
Download Sequence
A.thaliana
AGI-codeAT1G55800.1
DescriptionDomain of unknown function (DUF2431)
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
27.7669 Ahg470420 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein
46.9894 Ahg324657 Protein kinase superfamily protein
47.1593 Ahg494650 actin-related protein 9
47.244 Ahg483580 Protein of unknown function (DUF498/DUF598)
49.1935 Ahg478789 heat shock protein 60-3A
51.2933 Ahg929045 Tetratricopeptide repeat (TPR)-like superfamily protein
57.4456 Ahg488242 non-intrinsic ABC protein 14
67.9117 Ahg484510 prohibitin 4
79.8248 Ahg474991 P-loop nucleoside triphosphate hydrolases superfamily protein with CH (Calponin Homology) domain
83.2827 Ahg934198
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression