Detail



ID : Ahg314877

Blast(Query) A.halleri   /   A.thaliana (NOT RECIPROCAL)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|314877|fgenesh1_pm.C_scaffold_1003657
Sequence
ATGTCGTCCA CCGTTTCCGT TTCCGCTTCC GCCGCAACGG ACGGCCAACC AACGTGGAAG AAGAAGCAGA CGCAGTCGAA AGAACAAACC TCAAATCCTT CACTTCCAAA TGATTTAGTA GTAACCTGCT TAGCTCGCGT CTCGAGATCG TATCACCCAA ATCTCTGCTT AGTCTCCAAA AACTTCCGCT CAATCATTGC TTCACCGGAG CTTTACCAAA CCCGAACCCT CTTAGGACTC ACCGAGAATT TTCTCTACGT GTGCTTACTC TTCCCTCATG AAGCTAACCC TCGCTGGTTC ATTCTCAAAC CTAATCAAAC CCTAACCAAT CACACCACTA AGAAGACGAA GAAGAAGAAG AAGAAGAAGA AGAAGGATTC AAGAAGTGGC AATCGTTTAG CTTCAATCAC AATTCTCAAT TCTCCTACAG TGGAATGGTC AGGTCTTGTA GCTGTTGGTT CTAATCTCTA CGCCATTAGC AAAGACATTG AAGAAGCTCC TCACTATAAC ATTTGTTTTT TTGATTGTCG AACTCATACT TGGCTTGAAG CTCCAAGAAT GTCATTATCT CACCCGGATG GTGATTCTGA GAATCCAGAT TCTTTGAACT GTGTTGAAGT TTACAACACA AAGACTCAGA CTTGGAAACC TGTACCACCC GAAACATTGA GATACGAATT TGATATTGTA CAAGGAAAGA TTTACATGAG CTTGGATGCA GTGTTTGGTG TAGCTTTTAA GCCAAAGGAT TTGAAATGGG AATTGGTAGG ATTGGATATA GATTCGGATC AGTGTCCTTT TTTATGGAAA AAGTTTAGTA TTGCGGGATC GGTTTGGAAA AGAGTAGCGG GTTTAGAAGG GCTACCGAAG TTTGCTAGTT ATTGTACTGT TAGATTGGCG GATTACGGTG GTAAGTTGGT GGTTTTTTGG GATAAGTATG TGCCTGCTAG TGGGTATAAG AAGAAGATGA TTTGGTGTGC AGAGATTTCG CTTGAAATTC GCAGTGGTGA AGAGATTTCG GGGAAGGTCG AGTGGTTTGA TTCAGTGCTT ACAGTTCCTA AGTCTTATAA ATTCGTGAGT GCTATCGCTG CTACTCTTTG A 
Length1101
Protein Sequence
Protein Residue
Map Locationscaffold_1: 29641521.. 29642700
Download Sequence
A.thaliana
AGI-codeAT5G48990.1
DescriptionGalactose oxidase/kelch repeat superfamily protein
TAIR curator summaryencodes an F-box protein that interacts with SKP1 and likely to be involved in ubiquitin-mediated protein degradation.
Alias
Gene coexpression
MR
MR Locus Description
52.5357 Ahg940156 CBL-interacting protein kinase 2
59.2284 Ahg936117
59.6825 Ahg470152
64.0625 Ahg329829 Tetratricopeptide repeat (TPR)-like superfamily protein
81.5904 Ahg941035 Ankyrin repeat family protein
94.6995 Ahg934176
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression