Detail



ID : Ahg315485

Blast(Query) A.halleri   /   A.thaliana (NOT RECIPROCAL)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|315485|fgenesh1_pm.C_scaffold_2000518
Sequence
ATGATTTCGA AGAAGAAGAT AACTTCGTTA ATTATCTGTT CTTTTCTGTT GCTTCTTCTT CCAATCGCGT TTTCTAGGCC GACAAGAAAC TTAGATGGAA CAAGTCCAAG AGCTCCAACT GTTCAACAAA TAAGAAACAG ACATGGAACT AGAGAGGTGA TAGTGGACAA TGGGATTATT CGTGTCAGTT TCTCAAGTCC TCAAGGACTT ATAACTGGCA TCAAATACAA AGGAGTCAAT AATGTTCTCA GTCCACATCA ACGAGCTCGA GGGTACTGGG ACATAACATG GCAAGGAGAA AAGACTCGTG GTGGCATAGA TCGAATCGAA GGAACTAAAT TTAGAATCAT AACTCAAAAC CAAGAACAAG TGGAGATTTC ATTCTCTAGA ACATGGGAGA GTGGTTCTGG TTCTCATATT ATTCCATTAA ACGTAGACAA GAGGTATATT ATACGTACAA ATTCTTCAGG ACTCTACGCA TACGGAATTT TCGAGAGGCT TCCCGAATGG CCAGAAGTTG AGATGGGTCA AGTTCGAATG GTATTCAAAC TCGACCAAGA TAAGTTTCAT TACATGGCAG TCGCGGATGA TATACAAAGA GAGATGCTAA CGGACAATGA CCGCGATATC CATCGTGGTC ATGCCAAGGC TCTTGGTTAT AAAGAGGCTG TACAATTGAT TCATCCTCAT AACTCCATGT TCAAAGACCA AGTTGATGAT AAATACCAAT ACTCATGTGA GATCAAAGAC ATCAAGGTGC ATGGTTGGAT CTCAACTAAA TCCCACGTTG GCTTTTGGAT TATCTCATCG AGTGGCGAAT ATCGCTTTGG TGGACCGATG AAACAAGAGC TCACATCTCA TGTCGGCCCA ACAGCCATTG CAAGCTTTAT AAGCGGGCAT TATGTTGGTA CGGACATGGA CACACGTTAC AAAAGTGGTG AAGCGTGGAA AAAAGTCTTA GGACCTATTT TTATTTACTT AAACTCCGGC GATGAATTAT TATGGGAAGA TGCTAAACGA CAGTCTAAAG AAGAAGTTAA AGCCTGGCCG TACGATTTTG TAGCATTCTC TGACTTTCCT TCTCGTCGAG AAAGAGGAAC CGTTACCGGT CGTCTTCTAG TCAACGACGG ATTCTTAACG CCGGGGAGAT TTGCATATGT CGGTTTAGCA CCACCGGGAG AAGCTGGTTC GTGGCAGACA AATACTAAGG GTTATCAGTT TTGGACAAAG ACGAACGAAA CCGGTTATTT CAAGATTGAT AACGTTAGAC CAGGAACTTA CAATCTCTAT GGATGGGTTC ACGGTTTAAT CGGAGACTTT CTATACCAAA ACCTTCCTCC TAGAAATGGT CCAACGCTAT GGGAGATTGG TGTACCGGAT AGAACAGCAC GAGAATACTT TGTACCGGAG CCATACAAGA ACACAATGAA CCCTTTATAT CTAAACCACA CGGACAAGTT TAGGCAATAC GGATTATGGC AACGATACAC AGAGTTATAT CCAAATCATG ACCTCATTTA CACAATTGGA GTTAGTAAGT ATAGCCAAGA CTGGTTCTAC GCTCAAGTCA CAAGAAACAA CGGTGATTCG ACGTACACAC CAACTACATG GCAGATCGTG TTTCATCTTC CATACGTGAA CATGAGAGGA AGCTACACAT TGCAGCTAGC TTTAGCCTCG GCTGCACGGG CTAATCTACA AGTACGGTTC AATAACGAAT ACACGAGGCC ATTCTTCTCA ACGGGCTATA TTGGAAGAGA TAATGCTATA GCAAGACATG GAATCCATGG ACTCTACCGG CTTTATAGCA TCAATGTACC TGGAAGATTG CTACGAACAG GGACCAACAC GATTTATCTT CGACAATCTA AAGCATCAGG ACCATTTGAA GGACTTATGT ATGATTACAT TCGTCTCGAA GAGCCTTCTA GAGTTTAG 
Length1938
Protein Sequence
Protein Residue
Map Locationscaffold_2: 7888585.. 7889229
Download Sequence
A.thaliana
AGI-codeAT4G38030.1
DescriptionRhamnogalacturonate lyase family protein
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
26.5895 Ahg936611 P-glycoprotein 17
38.3145 Ahg315689
48.2079 Ahg927998
50.7346 Ahg945592
57.7062 Ahg897183 Polynucleotidyl transferase, ribonuclease H-like superfamily protein
79.4103 Ahg925744
82.6922 Ahg484614
84.7467 Ahg486927 cation exchanger 4
87 Ahg352619
92.747 Ahg311711 Heavy metal transport/detoxification superfamily protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression