Detail



ID : Ahg315617

Blast(Query) A.halleri   /   A.thaliana (NOT RECIPROCAL)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|315617|fgenesh1_pm.C_scaffold_2000650
Sequence
ATGGATCATT CAGAAAACGT TCCATCTAAT GATCAACACG AAAATGTCAC CCTTGTTGCA CCATCAGAAG AGCACGAGAT CATGGTCTCT GCTCTGCAAC AAGTGATATC TAACTCCAGA GCTGACGCGT CATCATCAAA CTTGATCGCA AGCGAAGGTC TTCCGCCTCC AGACGCTGGC CCTTGCTGCA CATTACAACG GCCGCACCGA GAGATAGAGA AGGAGAAGAA ATACAAAGGA GTGAGGAAAA AGCCATCGGG TAAATGGGCG GCGGAGATAT GGGATCCGAG TTCGAAATCA AGGAAGTGGC TTGGAACGTT TCTAACGGCA GAGACGGCGG CGAGTTCTTA CGATGAGGCT GCGCGGAGCT TGTCAGGAGA ACATCAGCAA GACGTGGCAA AACGAACGGA GGAAGAATTA AACGGCGGCG GAGATGACTG A 
Length441
Protein Sequence
Protein Residue
Map Locationscaffold_2: 9607947.. 9608828
Download Sequence
A.thaliana
AGI-codeAT5G67000.1
DescriptionIntegrase-type DNA-binding superfamily protein
TAIR curator summaryencodes a member of the ERF (ethylene response factor) subfamily B-6 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 12 members in this subfamily including RAP2.11.
Alias
Gene coexpression
MR
MR Locus Description
3.31662 Ahg931193
5.65685 Virus1219
7.2111 Ahg936207 Putative membrane lipoprotein
7.34847 Ahg948035 ECA1 gametogenesis related family protein
8.48528 Ahg905600
8.48528 Ahg932974
8.77496 Ahg938769 Plant self-incompatibility protein S1 family
9.21954 Ahg921168 Plant thionin family protein
9.79796 Ahg914882
9.94987 Ahg925935
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression