Detail



ID : Ahg315838

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|315838|fgenesh1_pm.C_scaffold_2000871
Sequence
ATGGCTAGAA GCTTAGTTCA TGAAAGTTTT GATGACATTT CCATTCTGCT AATCGACCAT GACACTGCAT CAGTCGCGTC TCTCACGTCA ATGCTTAAAC AATTTTCAAA AAGAGTGATG AGCGTGGATG TGGCAAGTAA GGCTTTATCG ATGATTGAGA AGCAGAAGAA GGACATTGGA CTTATCATAG CCAACATTGA AATGCCTCAC ATCGACGCAG ATTCCTTCCT CACCGTTTTG CTTCACAAAG ATATTCCTCT CATATTGATC AATCCAGAGA TAAAGACAAA GAAACCATCA GATCTTTTGA TAAAAAGAGC GTGCTTTTCT CTAGATCAGC CAATTTCTGA TAATGACATC AAAAACATAT GGCAGCACGT GTTACCTAAA AAGATTCAAG AGTCAAAGAA AATCAACATA ACGATTGTTA ACCAGGAGAA TGGCACGGAC AAAGATATAA ATCAGATAGA AGTTTTCAGG GCAAGCCTTA AGAGACAGAG AACAAGTCAA GCTTCTTTGT TAGGAAGACA ACCTTTTATC GACACATTCA CAATTTCCGA AACATCCCAA AAGAGAAAAA ATAGGGCAAA TGTTGAATGG AAAACTAAAC CAGGTTGTCT TATTGGGATT GAGAATAAGA GAAAGGAATG GAAGAAAATG GATAGTAGTG TTGTAAGACG TAGAAGTTTA TGGACTAATG AGCGTCATAT GAAGTTTTTA GCTGCTATCT CCATTCTAGG TGAAAAAGTT TTATTTAAAA AACCTATCAC CGAGAGAAAC AAAAATATGC CAAAGTTTCA TGTAGGCGGA AAATCGGATC TGAGCAATCA TTCACTTGTT GGTAACATAT TTAACAAGTC ATCTATAAAT GTTAACTATG TTCCTTCAAC CATAAGTAAT AACCCACCTT ACAATATTCT TTCTACCGAT AATGCTAACC ATACTAGTTT AGGTAGTGAA AACCTTCCTA TCCTTTCTGG TTTACCATCA AATGTTCGTG CATCTAACAC ATGCGCATTT CAGATGGAAT CCACAAAGAT TTCCATTCCG CAGTATGATC CTAATCCATT TCACCTACCT AGATCTGTCC TTGAAACTGA TGTAAGCCAA ATAGATTTAG ATTTTACATC TACACCCGAT TCTTTTCATC CTTTAGCAGA TCTATGCACT ATGAACTATA CCATGAACCC TTTTGAAACT AATATAGACC AAATGGATTG GCTTCCATTT ATAGAAAATT ATAGTCATCA TGAAATCAAT ATGAACCATA TGGATTGGGA TCATTCAATA GAAAATTTCA TTCTTCTTGA AACTGATGTG AACATAAGTT TTCCTGAAAA ACATACAAAC CAGATGGATT GGGTTTCTTC AGGAGAAGGT TATGTTCCTT TTGAAAATGT GAATCCCTCT AAAGTAGATA TAAGCCAGAT GGACATAGAT TATTCTCAAG AGGAAACTAA TACAAACCAT GTGGGTTTTG TTTCTTCTGA AATACGTTAT GGCATCCCTC CTAAAACTGA TATGACCATT CTTGAAGCCA ATTATTCAAA CATGGTAGAT TGTGTTTTTC CTAAAGATAT AAGTTCACTT GAAACTAATA CCATCCAAAA GGATTTGGTT TCTTGTAAAA CAAGTTTTGC TGCATTGGAT AACATAGTTC CTCTTGAAGC CAATATGGAA GAGATGAACT ATGTTTCTTA TGATGAAAGT TGTGATGCTC CGATTGAAGA TCTGATTTCT TTTGACATTA ACGTGGATGA GAAGGATATG CCCTCTTGGT TGGACGACAA TGGTTTTTTT GAAAGAGATA ATATGATGAA GTCTTGCGAA TATCACAATG TAGAAATTGT GAATCAAAGA GATCATTTGA AGGGAGAAGA TAATTTTGAT GATTATCGTG ACAACATGGA TTGGATTTAT GAGGTAATGA ATATTTCTTA A 
Length1941
Protein Sequence
Protein Residue
Map Locationscaffold_2: 12159741.. 12163042
Download Sequence
A.thaliana
AGI-codeAT1G68210.1
Descriptionpseudo-response regulator 6
TAIR curator summarySimilar to ARR response regulator proteins that function in two-component signal transduction but lacking a conserved D-D-K motif in the receiver domain
Alias[APRR6][PRR6][pseudo-response regulator 6]
Gene coexpression
MR
MR Locus Description
5.65685 Ahg353031 basic helix-loop-helix (bHLH) DNA-binding superfamily protein
12.6491 Ahg905912
12.8062 Virus1922
13.4907 Ahg914248
14.4914 Ahg922209 F-box and associated interaction domains-containing protein
17.3205 Ahg888698
17.4929 Ahg946682
24.7992 Ahg479186 Plant invertase/pectin methylesterase inhibitor superfamily protein
25.6905 Ahg470714
30.4138 Ahg921301
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression