Detail



ID : Ahg315894

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|315894|fgenesh1_pm.C_scaffold_2000927
Sequence
ATGACGGACA CGACAGATGA TATCGCGGAG GAAATCTCAT TCCAAAGCTT CGAAGACGAC TGCAAATTGC TCGGCAGTCT CTTCCATGAC GTGTTACAAA GGGAAGTCGG CAACCCATTC ATGGAAAAAG TTGAACGCAT TCGGATTCTT GCTCAGAGTG CGTTAAATTT GCGAATGGCT GGTATTGAGG ATACCGCAAA CCTTTTGGAG AAGCAATTGA CTAGTGAGAT ATCCAAAATG CCACTAGAGG AAGCCTTAAC CTTGGCTCGT ACATTCACTC ATTCTCTTAA CTTAATGGGC ATTGCAGACA CTCATCACAG AATGCATAAA GTCCATAACG TTACACAACT TGCTAGATCT TGTGATGATA TATTCAGTCA GCTATTGCAA AGTGGAATTT CTCCAGAGGA ACTTTACAAT ACTGTTTGCA AACAGGAGGT CGAAATTGTT CTTACTGCTC ATCCTACTCA AATTAATCGA AGAACCTTGC AGTACAAGCA TCTTAGAATT GCTCATCTTC TAGAATATAA CACCAGATCA GATCTCAGCC TTGAAGATCG CGAAACCCTC ATTGAAGATT TGGTTAGAGA GATAACTTCA CTATGGCAAA CTGATGAGCT TAGACGTCAG AAACCTACTC CAGTTGATGA AGCTAGAGCT GGTCTGAACA TTGTGGAGCA ATCCCTTTGG AAAGCTGTAC CACATTACCT GCGTCGTGTC AGCACTTCCT TGAAGAAGTT CACAGGGAAG CCACTTCCAC TAACATGCAC TCCTATAAAA TTTGGTTCTT GGATGGGAGG TGATAGAGAT GGAAACCCAA ATGTCACGGC AAAGGTCACG AAAGAAGTAT CTCTCTTGTC TAGATGGATG GCTATCGATC TATACATAAG AGAGGTTGAT AGCTTAAGAT TTGAACTATC TACGGATCGA TGCAGTGATA GGTTTTCAAG ATTGGCAGAT GAAATTCTTG AAAAGGATTA TGATAGAGGC CAATCAAATT TCCAAAAGCA ACAAAGTTCA TCATCCTTGC CAACACAACT TCCAGCTAGA GCTCACCTTC CTTCTTGCAT TGACTTTGGT GAATCACGAC ATACCAAATT CGAAATTGCG ACGACAGATT ATATGCCACC CAATCTTCAG AAGCAGAATG AACAAGACTT TCCGGAAAGC AACTGGGAGA AAACTGACAA TGGTTCGCAG TCCGGTCTTA CTTCTCGAGG TTCTTTCTCA TCTACTTCTC AACTTCTTTT ACAGAGGAAA CTATTTGAGG AATCTCAGGT TGGGAAGACT AGTTTCCAAA AGCTACTAGA ACCACCTCCA CTTAAACGAG CTGGAAGTGC TCCTTATCGT ATTGTTCTTG GGGAAGTAAA AGAAAAGCTT GTGAAGACAA GAAGACTTCT TGAACTTCTA ATTGAGGGTC TTCCTTGTGA GTATGACCCT TTAAACTCCT ATGAAAAATC AGATCAACTT CTGGAACCAT TGCTCCTCTG CTACGAATCT CTACAATCAT CGGGTGCTAG TGTACTAGCT GATGGACGAC TTGCTGATCT CATCCGTAGA GTTTCTACCT TTGGAATGGT TTTGGTGAAA CTTGATTTAC GCCAGGAATC TGCAAGACAT TCTGAAGCAT TGGATGCAAT TACAACATAC TTGGATATGG GTACTTATAG TGAATGGGAT GAAGAGAAAA AATTAGAATT TTTGACCAGA GAACTAAAAG GGAAACGACC TCTTGTTCCT CCATGTATTA AGGTTGGTCC TGACGTCAAA GAAGTATTGG ACACATTCCG AGTCGCTGCG GAGCTTGGAA GTGAATCACT TGGAGCTTAT GTTATTTCTA TGGCTTCTAA TGCAAGTGAT GTCCTTGCTG TGGAGCTTCT TCAAAAGGAT GCTCGACTTG CTATAACTAG CGAACATGGA AAACCATGTC CCGGTGGAAC GCTACGAGTG GTACCTCTTT TTGAAACGGT GAATGATTTA AGAGCCGCTG GTCCTTCGAT AAGGAAATTG CTCTCAATCG ATTGGTATAG GGAACACGTC CAAAAGAACC ACAACGGTCA CCAAGAGGTA ATGGTTGGAT ACTCTGATTC TGGAAAAGAT GCTGGACGTT TTACAGCAGC ATGGGAACTC TACAAAGCAC AAGAAAATGT TGTGGCTGCT TGTAATGAAT TTGGAATCAA AATCACATTA TTTCATGGAC GAGGAGGAAG CATTGGTCGT GGTGGTGGTC CGACTTATCT CGCTATACAG TCCCAACCAC CAGGCTCTGT AATGGGCTCT TTGCGTTCAA CTGAGCAAGG TGAGATGGTT CAAGCTAAGT TTGGGATACC ACAAACGGCT GTTAGGCAAC TAGAGGTATA CACAACCGCT GTTCTACTTG CTACCTTAAA ACCTCCTCAG CCACCTCGAG AGGAAAAATG GCGAAACCTA ATGGAAGAAA TCTCTACAAT CAGTTGCCAA CACTATAGAA GCACAGTGTA TGAGAACCCA GAGTTCCTAT CTTATTTTCA TGAGTCAACA CCTCAAGCAG AACTCGGTTT CCTCAATATA GGAAGCCGAC CAACGCGAAG AAAGAGCTCT AGCGGCATAG GTCATCTCCG AGCTATCCCT TGGGTCTTTG CTTGGACTCA AACAAGATTT GTTCTTCCAG CTTGGCTTGG TGTAGGGGCT GGCTTAAAGG GAGTCTCTGA GAAGGGTCAT GCGGATGATC TTCAAGAGAT GTATAAAGAA TGGCCATTTT TTCAGTCCAC CCTTGAACTT ATAGAGATGG TGTTAGCTAA AGCTGACATC CCCATGACCA AACACTACGA CGAACAACTT GTGTCTGAGA AAAGAAGAGG ACTTGGCAAT GAACTAAGAA AGGAACTAAT GACTACTGAG AAGTACGTTC TTGTGATAAG TGGCCACGAG AAACTCTTGC AGAACAATAA GAGCTTGAAG AAACTCATTG AGAGTAGACT TCCGTATCTC AACGCAATGA ACATGTTACA AGTTGAAATT CTTAAGAGGC TAAGACGTGA TGAAGATAAT AATAAGCTTA GAGATGCTTT GCTTATCACA ATTAATGGTA TCGCTGCAGG AATGAGAAAT ACCGGTTAA 
Length3099
Protein Sequence
Protein Residue
Map Locationscaffold_2: 12544962.. 12550128
Download Sequence
A.thaliana
AGI-codeAT1G68750.1
Descriptionphosphoenolpyruvate carboxylase 4
TAIR curator summaryEncodes one of four Arabidopsis phosphoenolpyruvate (PEP) carboxylase proteins. But, it is more similar to bacterial PEP carboxylase than plant PEP carboxylase. Efforts to express this enzyme and to demonstrate its enzymatic activity in E.coli failed.
Alias[ATPPC4][PPC4][phosphoenolpyruvate carboxylase 4]
Gene coexpression
MR
MR Locus Description
6.7082 Ahg927883 F-box family protein with a domain of unknown function (DUF295)
10.247 Ahg913196 jacalin lectin family protein
15.3297 Ahg931494
15.7162 Ahg321593 O-acyltransferase (WSD1-like) family protein
20.7123 Ahg932118 Protein of unknown function (DUF1278)
23.3238 Ahg934565
23.6854 Ahg496328
30.1993 Ahg951548 F-box family protein with a domain of unknown function (DUF295)
31.4643 Ahg359144
31.9374 Ahg477403
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression