| Annotation |
|---|
| Description | jgi|Araly1|315978|fgenesh1_pm.C_scaffold_2001011 |
| Sequence |
ATGGCGCCGA AGCGCAAGAG AGCTACAAAG AAGGACGCGA GTACCAAATC CATTCCCAAA CCGAGGAAGA GAGCTCCTAA GCGAGCTAAA ACGGTGAAAG AAGAGCCGGT GAAATTCGTG GAGGAAGGGG AAAAGTATGT TGCGAGGTTT CTCGACGAAT CTATTCCAGA ATCTGAAGCC AAGAGTACTT GGCCTGACAG ATACAAACCG ATTACGGTAC AGAAACCTAA GGCTCCGTCA AGAAACACGA CGAAGGATGA TGAAAAAGAT AAGATCATTC GGGCTCGATG CCATTATAGA CGTGCGATTG TTGATGAGCG TCAGATATAT GAGCTTAATG ATGATGCTTA TGTGCAGTCT GGTGAGGGAA ATCAGCCCTT CGTTTGCAAA ATTGTTGAAA TGTTTGAAGG GGCTAATGGG AAATTGTATT TCACAGCTCG GTGGTTCTAT AGAGCTGATG ATACTGTAAT GAAACAGTTC AAGATTCTGA TTGATGATAA GCGTGTGTTT TTCTCGGAGA TTCGAGATAC AAATGAATTG GGATTACTTG AAAAGAAGTT GAACATTTTG ATGATTCCCT TAAGTGAAAA TGCTGCTGGG CCTATCGCTG CAACAAAAAC CTGTGATTAT TATTGCGATA TGAACTATCT CTTGCCTTAC GATACATTTG AAGCTTTACA ACAAGATACC AAAATGGCTG TAAGTGAAAG TTCAACAATA TCCAGTGATA CTGATGTAAA CGAAGGAGCT GCTGCTATAT CAGAGAATCA AGAAGGTTCT CAAGACACAC GAGTTCAAAG AGAGACAACT TTGCTTGACC TTTACTCCGG CTGTGGAGCT ATGTCCACAG GGTTGTGCAT GGGTGCACAA CTCTCTGGTT TGAACCTTGT CACTAAATGG GCTGTTGACA TGAATGCGCA TGCATGTAAA AGCTTGGGGC ATAACCACCC AGAGACACAC GTGAGAAACA TGTCCGCAGA AGATTTCTTG TTTCTGCTTA AGGAGTGGGA GAAGCTATGC ATTCATTTCT CTTTGAGAAA TTGTCCAAAT TCAGAAGAAT ATGAAAACCT TCACGGTATG ACTAATGTTG AGGACAATGA AGATGTCAGC GAGGAGAGTG ATGATGAAGA TGACGGCGAA GTTTTTACAG TGGAAAAGAT TGTTGGTATT TCCTTCGGAG TCCCTAAAAA GTTACAGAAA CGTGGTCTTT ATTTGAAGGT ACGATGGTTG AATTACGATG ATTCCCATGA TACCTGGGAG CCTATTGAAG GACTCAGTAA TTGCCGGGAA AAGATAAAGG AGTATGTCAA ACTTGGATAT GAATCTGGCA TCCTTCCGTT ACCAGGAGGT GTTGATGTTG TCTGTGGCGG GCCGCCATGC CAAGGAATCA GTGGTCATAA CCGCTTCAGG AACTTATTGG AGCCTCTAAA AGATGAGAAA AACAAGCAGC TTCTTGTTTA TATGAACATT GTGGAGTTTC TAAAGCCGAA ATACGTTTTG ATGGAGAATG TGGTAGACAT GCTTAAGATG TCTGAGGGCT ATCTTGCGCG TTATGCTGTG GGAAGGCTTA TCCAAATGAA TTACCAAGTC AGGATGGGAA TGATGGCGGC AGGAGCATAT GGTCTTGCTC AGTTCCGCTT GCGGTTCTTC TTATGGGGTG CACTCCCTAG CATGATGATT CCTCAGTTCC CACTTCCAAC TCATGATTTA GTACAGAGAG GAAATATTGT TAAGGAGTTT CAGGGAAACA CAGTAGCCTA TGATGAAGGC CACACTGTGA AGTTAGCAGA CAAGCTTTTA CTTAGAGATG TGATTTCTGA TCTTCCCGCT GTTGACAACA GTGAACAAAG GGACGAGATA CCATATGACC AAGATCCTGT GACACCATTT CAACAGTTCA TCAGATTAAG AAAGGATGAA GCGTTAGGTT CACTAACTAA GTCCAAGTCC AAAAAGCATG TCTTGTACGA TCATCATCCC CTGAATCTGA ATATTAATGA TTATCAACGA GTTTGTAGAG TCCCCAAGAG GAAGGGAGCG AATTTCAGGG ACTTTCCTGG TGTTATTGTT GGACCCGGTA ATGTAGTCCA CTTGGATGAG GATATGAAAA TCATGCTTGA ATCTGGAAAA CAATTGGTTC CCAATTATGC ATTGACGTTT GTCGATGGGA CATCGTCCAA ACCTTTTGGT CGCCTTTGGT GGGACGAGAT AGTCCCTACT GTTGTCACAC GTGCAGAACC GCACAACCAG GTGATCATTC ATCCAACGCA AGATCGTGTT TTATCCATTC GAGAAAATGC CAGACTCCAG GGCTTTCCTG ATGACTACAA ACTCTTTGGA CCAACGAAAC AAAAGTATAT CCAAGTCGGT AACGCGGTAG CTGTGCCAGT AGCAAAGGCC CTTGGATATG CTTTGGGAAT CGCTTTCCAG GGTCTCGCAG ATGGGAAGGA TCCACTTCTT ACTCTTCCTG AAGGTTTTGC ATTCATGAAG CCAAATCTTC CTTCCGAGCT TGCATGA |
| Length | 2517 |
| Protein Sequence | |
| Protein Residue | |
| Map Location | scaffold_2: 13128419.. 13133548 |
| Download Sequence |
|
| A.thaliana |
|---|
| AGI-code | AT1G69770.1 |
| Description | chromomethylase 3 |
| TAIR curator summary | Encodes a chromomethylase involved in methylating cytosine residues at non-CG sites. Involved in preferentially methylating transposon-related sequences, reducing their mobility. CMT3 interacts with an Arabidopsis homologue of HP1 (heterochromatin protein 1), which in turn interacts with methylated histones. Involved in gene silencing. |
| Alias | [CMT3][chromomethylase 3] |
| Gene coexpression |
|---|
| MR |
| MR | Locus | Description |
| 13.0384 |
Ahg472662 | MLP-like protein 423 |
| 13.0384 |
Ahg319369 | ARM repeat superfamily protein |
| 13.2665 |
Ahg485860 | histone H2A 11 |
| 14.7648 |
Ahg477690 | Li-tolerant lipase 1 |
| 16.4317 |
Ahg493476 | Transducin/WD40 repeat-like superfamily protein |
| 18.735 |
Ahg487523 | Eukaryotic aspartyl protease family protein |
| 21.8174 |
Ahg496451 | tubulin beta chain 2 |
| 22.0227 |
Ahg481792 | Pathogenesis-related thaumatin superfamily protein |
| 22.9129 |
Ahg331330 | methyltransferase 1 |
| 25.7488 |
Ahg940507 | Histone superfamily protein |
|
| RNA-seq |
|---|
Seasonal expression (July 2011 to June 2013) |
|
|
| The four seasons |
|
|
| Growth Chamber expression |
|
|