Detail



ID : Ahg316264

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|316264|fgenesh1_pm.C_scaffold_2001297
Sequence
ATGTCGATAC AAACTTCTGC AGCTTCACGA ATGATTCACT CCATCTTTCA AGTTCTGCTT GTTAGTCTTC TAGTTCTAGG ATCCGCCAGA TGGATCCTTG ATGAACTCAA AAGCAAAGAA AGTCGAATAT TCCAACTATA TCGTTTCAGA CAGAAAGAGG CAGTGTTTGT AACCAAAGAG GATCAGCTTG ATGAGAGCTG CAATGTCTTT GAAGGACAAT GGGTTTGGGA CAACGTCTCT TACCCTCTTT ATACTGAGAA GAGCTGTCCT TACTTAGTCA AACAAACAAC ATGTCAACGA AATGGACGGC CTGATTCTTA TTACCAGAGC TGGAGATGGA AACCGAGCTC ATGCGACTTG CCCAGGTTCA ATGCTCTGAA ACTGTTGGAC GTGTTGAGAA ACAAAAGACT AATGTTCATA GGAGACTCAG TGCAGAGAAG CACGTTCGAG TCAATGGTCT GTATGGTACA ATCAGTTATT CCTGACAAGA AGAAGTCCTT TCACAGGATT CCTCCTATGA AGATCTTCAA AGCTCAGGAA TACAATGTAT CCATCGAGTA TTACTGGGCA CCTTTTATCG TGGAATCAAT TTCAGATCAT GCAACTAATC ATACAGTTCA CAAAAGGTTG GTTAACCTTG ACGCCATTGA AAAACATAGC AAGAGCTGGG AAGGCGTTGA TGTTCTAGTC TTTGAGAGCT ATGTATGGTG GATGCATCAA CCTAAGATCA ATGCAACATA TGGAGATACT AGTGAAGTCC GAGAGTATAA TGTGACGACT GCTTATAAAA TGGCGTTAGA AACATGGGCC AAGTGGTTTG AGACGAAGAT CAATCCCGAG AAGCAAAGAG TTTTCTTCAC AAGTATGTCT CCGACTCATC TATGGAGCTG GGAGTGGAAT CCAGGGAGCG ATGGAACCTG TTATGATGAG TTATATCCAA TAGACAAAAT ATCATATTGG GGTACAGGAT CAAATCAAGA AATCATGAAG ATTGTTGGTG ATGTTCTAAG CAGAGTCGGA GAAAATGTCA CATTCCTGAA CATTACGCAA CTGTCAGAAT ATAGGAAGGA TGGACATACG ACTGTCTATG GCGAACGGAG AGGGAAGCTC TTGACAAAGG AACAGAGAGC TGATCCGAAA AACTATGGAG ATTGCATCCA CTGGTGTTTG TCAGGAGTTC CTGATACATG GAACGAGATT CTCTATGCAT ATTTGCTTCG CAGTCACCGC AATTTCTTTT GA 
Length1242
Protein Sequence
Protein Residue
Map Locationscaffold_2: 14788365.. 14789997
Download Sequence
A.thaliana
AGI-codeAT1G73140.1
DescriptionPlant protein of unknown function (DUF828)
TAIR curator summaryEncodes a member of the TBL (TRICHOME BIREFRINGENCE-LIKE) gene family containing a plant-specific DUF231 (domain of unknown function) domain. TBL gene family has 46 members, two of which (TBR/AT5G06700 and TBL3/AT5G01360) have been shown to be involved in the synthesis and deposition of secondary wall cellulose, presumably by influencing the esterification state of pectic polymers. A nomenclature for this gene family has been proposed (Volker Bischoff & Wolf Scheible, 2010, personal communication).
Alias[TBL31]
Gene coexpression
MR
MR Locus Description
9.27362 Ahg923468
9.27362 Virus1295
9.27362 Virus0426
9.48683 Ahg480435
13 Ahg942567
19.6723 Virus2909
19.6723 Virus0051
22.2486 Virus0498
24.6171 Ahg472336
28.8444 Ahg922624 DA1-related protein 3
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression