Detail



ID : Ahg316746

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|316746|fgenesh1_pm.C_scaffold_2001779
Sequence
ATGGCGGTCT TGTCTAAACC GGTCGCAGTA CCAAAATCCG GGTTCTCTCC AATCCCGGTT ATAGATATGT CTGACCCAGA ATCCAAGCAT GCCCTCGTCA AAGCCTGCGA AGACTTCGGC TTCTTCAAGG TGATCAACCA TGGCGTTTCC GCAGAGCTAG TCTCTGTTTT AGAACACGAG ACCGTCGAGT TCTTCTCGTT GCCCAAGTCA GAGAAAACCC TAGTCGCAGG TTATCCCTTT GGATACGGGA ACAGTAAGAT TGGTCGGAAT GGTGACGTGG GTTGGGTTGA GTACTTGTTG ATGAATGCTA ATCTTGATTC CGGTTCGGGT CCACTATTTC CGAGTCTTCT CAAAAGCCCG GGAACTTTCA GAAACGCATT GGAAGAGTAC ACAACATCAG TGAGAAAAAT GACATGCGAT GTTTTGGAGA TGATCACAGA TGGGCTAGGG ATCAAACCGA TGAACACAAT AAGCAAGCTT GTGTCTGACC AAAACACTGA TTCGATATTG AGACTTAACC ACTATCCACC ATGTCCTCTT ATCGACAAGA AGACCAACGG TGGGGAAAAT GTGATTGGTT TTGGCGAACA CACAGATCCT CAAATCATCT CTGTCTTGAG ATCTAACAAC ACTTCTGGTC TCCAAATCAA TATAACTGAC GGCTCTTGGG TCGCTGTCCC TCCCGATCAC TCTTCCTTCT TCTTCAACGT TGGTGACTCT CTTCAGGTGA TGACAAATGG GAGGTTCAGG AGCGTGAGGC ATAGGGTTTT AGCGAACGGT GGCAAATCTA GGGTTTCTAT GATTTACTTC GCTGGACCTT CGTTGACTCA GAGAATCGCT CCGTTGACTT GTCTTATGGA CAACGAAGAC GAGATGTTGT ACGAAGAGTT CACTTGGTCT GAGTACAGAA ACTCTGCCTA CAACTCTAGA TTGTCTGATA ATAGGCTTCA ACAATTCGAG AGAAAGACTA CAAATAATAA TACATTGTTT GATTAA 
Length996
Protein Sequence
Protein Residue
Map Locationscaffold_2: 17168183.. 17169453
Download Sequence
A.thaliana
AGI-codeAT1G78440.1
DescriptionArabidopsis thaliana gibberellin 2-oxidase 1
TAIR curator summaryEncodes a gibberellin 2-oxidase that acts on C19 gibberellins.
Alias[ATGA2OX1][GA2OX1][Arabidopsis thaliana gibberellin 2-oxidase 1][gibberellin 2-oxidase 1]
Gene coexpression
MR
MR Locus Description
14.9666 Ahg484746 RING/U-box superfamily protein
18.6548 Ahg483923 myb domain protein 12
19.5448 Ahg923583 Heavy metal transport/detoxification superfamily protein
20.3961 Ahg926394 octicosapeptide/Phox/Bem1p (PB1) domain-containing protein
28.2489 Ahg949787 low-temperature-responsive protein 78 (LTI78) / desiccation-responsive protein 29A (RD29A)
28.5657 Ahg484861
30.1993 Ahg946375 glycine-rich cell wall protein-related
38.9358 Ahg479675 UDP-Glycosyltransferase superfamily protein
43.0697 Ahg944656
43.7607 Ahg930279 Chlorophyll A-B binding family protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression