Detail



ID : Ahg317219

Blast(Query) A.halleri   /   A.thaliana (NOT RECIPROCAL)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|317219|fgenesh1_pm.C_scaffold_3000235
Sequence
ATGCTGAAGC CATGTCATCT CTCTTACTTC CTCTTGTTCT TCGTCTTCTT CATTTCACAA ATATCGTTCT CTTGCCCATA AGACCAAATA CAATCCCTTC TTGAGTTCAA GAACTTGCTG ACTCAAAACA TCAATAACCA GTCCACAGCA ATAATCACCT TGAAAGGTTT AGAGACATGG AGGCCAAACT CAGATTGCTG CAAGTGGCAA CTCGTCAGAT GCAACACTCG TTCCCCTACC AGAGAAGTGA TAGACCTAAA TCTGCACTCT CTTATCCTCT CTGGCTCAGT GAGTTCAAGC ATTCTGAGAC CGGTTCTGCA GATTCCTGGA GATGGGTTTG TGAACTTGAC CAGTTTTATC TCTCTTGACA TGAGTGATAA CAGCTTTAAC GGCTCTATCC CTCCTGAATT GTTCTCCTTA AAGAATCTTC AGTGCCTTGA CTTGAGCAGG AATGATATTG GTGGTACGTT GAGTGGTAAC ATCAAAGCGC TCAAGAATCT GCAGGAACTG ATCTTTCTTT CCGAACTGCT GACGCTGACA CTGAGGCAGA ACCTGTTCAG TGGTTCTATT CCGTTGTCTG TATCACAGTT AACGAAGCTC GAAACTTTTG ATCTCCAGAA CAATTCCTTG TCTTTTGAAA TTCCCGACGG TATTGGGAAG TTAGCCAATA TATCAACTCT GTCTTTGAGC ATGAACAACT TGTCTGGTGG AATTCCATCG TCCATTCAGA ATCTGACAAA TCTTGAAACC CTTGAGCTTG AGAATAACAA TGGCTTGTCC GGTGAGATTC CTACTTGACT GTTTGGTCTT CAGAAGCTGA AGATATTGCG GTTAGGAGGA AACAAACTCC AATGGAACAA GAATGTCTCT GTCTATGCAC AGTCTAAGTT AACACATCTG TCACTTAGAT CTTGTGGCTT AGAAGGGAAC ATTCCGGATT GGCTCAAGAA TCAAACAGCT CTTCTTCCTG GATCTGAGCA TGAACAAACT CGAAGGAAGT TTTCCCAAAT GACAACAAAT TCTCAGATTC ATTACCTCCT AGTTTGTTTT CAGTCTATAA GCTTATCGGT TCTTGCGCTA TCAAGAAACA ACTTCTCTGG TCAGATTCCT GATACGGTAG GTGAAACATG GGATCAGTAC CAAAGTCTAT CTCAAAGATC CACAGGCTGC TGTTGCTGGA CTATCATTGC TTGCGTTACT CGATATATCT TCCAATGGTT CTCAGGGGAT GTTCCAGCTT TCTTTGGTTC AAACACCATA ATGCTATCTA TGAGTCAGAA CAACTTCAGT GGCGAATTCC CTCACGACTT CACCAATCCC CCATCTTTGA TGCATTTTGA TCTTCATGAC AACAAAATCT CCGGTAATAG GTACTTACCT GAGAAACAAT TCCCTGGAAG TCTCAAGGTC TTGGATCTCT CTGAGAACCA TCTTGATGGA TCTCTCCCTT CATCTCTTGG GAATCTTACA AGCATGAAAG AATCTCTCTC GAGCTCGTCT TCGCCTTTGC CTTTCATGTA CAGTTTCACT ATCGAAATCT TAGCAGTGAA CTGGAAGAAT TCAAAGCAAA GTCTTGCCAA CAGAAACCTC TACCTCTCCA AGAACAAGCT ATTCGGAGAA ATCCCATCTT CTTTAGGCTC TCGCAAAAGC TTAAAGCTTT TAAACCTCTC ATACAACGAC CTCTCTAGAT TGATCCCACA AAGTTTTGGA AATCTTGAGA AGGTAGAGAT CTTAGACCTT TCACACAACA ACCTCTCAGG CGAAATCCTG CAGACACTTT CCAAGCTCAG GGAGCTGAAT GTATTGGAGT TGAGCAACAA CAAACTTACA GGTAGAATCC CTGAGAGTCC TCAGCTAGAC AGATTGAACG ATCCAGACAT TTACGCGAAC AACAACAAAC TATGTGAATG CAAATCCAAG AACCATGCTC TACACAGACC AAGCAGCCAG GGGAAGAGGA AGTTAAAGGG GAAACAATGT CTTCATGGAA TGGAAAGCTG CAGTCACTGG CTTTAA 
Length2016
Protein Sequence
Protein Residue
Map Locationscaffold_3: 961320.. 963694
Download Sequence
A.thaliana
AGI-codeAT4G04220.1
Descriptionreceptor like protein 46
TAIR curator summary
Alias[AtRLP46][RLP46][receptor like protein 46]
Gene coexpression
MR
MR Locus Description
56.7362 Ahg927049 Auxin efflux carrier family protein
65.6125 Ahg487314 RING/U-box superfamily protein
72.8286 Ahg897254 Meprin and TRAF (MATH) homology domain-containing protein
80.399 Ahg496085 ZRT/IRT-like protein 2
96.1769 Ahg494053 histidine-containing phosphotransmitter 3
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression