Detail



ID : Ahg317861

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|317861|fgenesh1_pm.C_scaffold_3000877
Sequence
ATGGAGGCCC AATACCGGAA CCACGACGGA GACACCTCCT TCTCTAGCCT CCGTGTCTAC CTCAACTCTC TCTCCGACAC TCCCTCCCGT TTTTCCCGCC GCGCCGTTTC CGTTTCCACC TCTTACGACG AGATGAGCCG CGTCCGCGCC GTCTCCGGCG AGCAGATGCG CCGCACTCTC CGTTGGTACG ATCTCATCGG ACTCGGAATT GGCGGAATGA TCGGAGCCGG CGTTTTCGTC ACCACCGGCC GTGCTAGTCG TCTCTACGCT GGTCCATCAA TCGTTGTCTC CTACGCAATC GCTGGACTCT CCGCTCTCCT CTCCGCCTTC TGTTACACCG AGTTCGCCGT CCACCTTCCC GTCGCCGGCG GTGCTTTCAG CTACATCCGT ATCACATTCG GCGAGTTCCC GGCGTTTATA ACCGGAGCAA ATCTGATAAT GGACTACGTA ATGTCAAACG CCGCCGTTTC AAGAGGCTTC ACAGCTTATC TCGGATCTGC TTTCGGAATC TCAGCATCGG AGTGGAGATT CATCGTCTCC GGTCTCCCAA ACGGATTCAA CGTAATCGAT CCAATCGCCG TTATCGTCGT CCTCACCGTC ACGTTCATCA TTTGTTACAG TACGAGAGAG AGTTCGAAGG TGAATATGGT TTTAACGGCG TTACACATTG CATTCTTAGT ATTCGTGATC GTCATGGGTT TCTGGAAAGG AGACATAAAG AATCTAACCC GACCCGATAA CCCGGAAAAT CCATCCGGAT TCTTCCCGTT CGGGGTTTCG GGTGTGTTTA ACGGAGCAGC AATGGTTTAC CTAAGCTACA TAGGATACGA CGCCGTTTCG ACAATGGCTG AAGAAGTAAA AGACCCGGTC AAAGACATAC CAATGGGAAT CTCTGGCTCG GTCGCAATCG TCATTGTACT TTACTGTTTA ATGGCTATCT CTATGTCAAT GCTTCTCCCG TACGATCTGA TAGATCCGGA AGCACCGTAC TCGGCCGCGT TTAGTAAATC GGAAGGATGG GAATGGGTGA CGAAAGCGGT AGGGATAGGA GCAAGTTTTG GGATATTAAC GTCGTTGTTA GTAGCCATGT TGGGTCAGGC TCGGTACATG TGTGTCATCG GACGGTCAAG AGTTGTCCCC ATTTGGTTCG CTAAGGTTCA TCCCAAGACA TCTACTCCAG TCAACGCTTC CGCTTTTCTT GGAATCTTCA CGGCGTTTCT CGCCCTCTTC ACCGACCTAA ACGTCCTCCT AAACCTAGTG TCCATTGGAA CGCTATTCGT CTTCTACATG GTCGCAAACG CTGTTATATT TCGCCGCTAT GTAGCGGTCG GATACACCAA GCCATGGCCA ACACTCTCCT TCCTCTGCCT ATTCTCCATA ACCTCAATTT TCTTCACCTT AGTCTGGCAA CTTGCACCGC GAGGCCCACC TAAATGGTTC ATACTCGGAG CCAGCGCGGT CACGGCTATA GCCATCGTTC AGATATTCCA TTGTGTAGTA CCTCAAGCTA GGATCCCTGA GTTTTGGGGT GTACCGTTGA TGCCGTGGAC TCCATGCGTT TCAATATTTT TGAACATTTT CTTGCTTGGA TCATTGGATG CTCCTTCGTA TATCAGATTC GGGTTCTTCT CGGGATTAGC AGTTCTCATA TATGTGTTTT ATAGTGTTCA TGCGAGCTAT GATGCTGAAG GAGACGGGTC TCTTGATTTC AAAGATGTTG AAAGCCTTGA AAGAATCAAC ATAGTGTTGA GTTAA 
Length1755
Protein Sequence
Protein Residue
Map Locationscaffold_3: 4000574.. 4003846
Download Sequence
A.thaliana
AGI-codeAT3G10600.1
Descriptioncationic amino acid transporter 7
TAIR curator summaryEncodes a member of the cationic amino acid transporter (CAT) subfamily of amino acid polyamine choline transporters.
Alias[CAT7][cationic amino acid transporter 7]
Gene coexpression
MR
MR Locus Description
8 Ahg927998
10.8167 Ahg476413 Protein kinase superfamily protein
15.0997 Ahg938233 plastocyanin-like domain-containing protein
16.3707 Ahg891734
19.5959 Ahg942089
23.3666 Ahg919223 Protein of unknown function (DUF604)
23.4307 Ahg922132 WRKY DNA-binding protein 14
30.9839 Ahg914329
34.4674 Ahg931789
35 Ahg943128
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression