Detail



ID : Ahg318024

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|318024|fgenesh1_pm.C_scaffold_3001040
Sequence
ATGCAGCTCG TAGATGTAAA ACAATCACTG GAGGCGGTGA TGAACAACAA ATTGAGTGAT TTTGAGAAAA GTTTGTACAA AAAACTCAAG AGTGGAAAGC TCGAGGTGAA AGTCTCCTAC CGGACTTTCC TCTGTCCCTA TTGCCCCGAT AACAAGAAGA AGGTTGGTTT GTATGTTGAC ATCCTTCAAC ATGCTTCTGG AGTTGGTAAT AGCAAATCCA AGAAAAGAAG TTTGACTGAG AAGGCAAGCC ACCGTGCTCT TGCCAAATAC CTTATTAAAG ATCTTGCACA TTACGCTACA AGTACAATAT CTAAGCGCTT AAAAGCCAGA ACATCACTCA CTCCTGCTGA AGGCGGCGAT ACTCCTCTAG TTTATGATGA TGATCAATTC GAGAAACTTG TGTGGCCTTG GAAAGGCGTT TTGGTTAATA TTCCCACGAC GATTACACAA GATGGTCGGT CTTGTACTGG AGAGAGTGGT CCAAAACTTA GAGATGAATT AATCCGAAGA GGATTCAACC CAATTAGAGT TCGTACTGTG TGGGATCGTT TCGGTCATTC AGGAACCGGA ATAGTGGAAT TTAACAGAGA TTGGAACGGA CTTCACGATG CTTTGGTGTT CAAGAAGGCC TATGAAGCAG ATGGTCATGG GAAAAAGGAT TGGCTGTGTG GTGCTACCGA CTCGAGACTT TATGCATGGC TTGCCAATGC TGATGATTAC TATAGGGCTA ACTATTTAGG AGAAAAATTG CGGAAGATGG GTGACCTCAA AAGTATTTCT AGGTTTGCTG AAGAAGAGGC AAGGAAAGAC CAAAAGCTTT TGCAGCGTCT GAACGTAATG GTTGAGACCA AACAAAATCG GTTGAAGAAG TTAGAGATAA AATATTCACA GGATTCAATT CGACTTAAGT ATGAGACTCA AGAAAAAGAA AAGATTCTCC ATTGTTACAA TGAAGATCTG ACAGGAAGAC AACAAAAATC GACTGATCAC TTCAATAGGA TTTTTGCTGA TCATGAAAAG CAAAAGGTGC AGCTGGAGTC TCAGATAAAG GAACTTGAAA TTAGAGAATT GGAGTTGGCA AAACGTGAGG CAGAGAATGA AACACAGAGG AAAATAGTGG CAAAAGAGCT TGAACAGAAT GCTGCTATAT TTAGTTACGC TCGACTAGCT GCCGTGGAAC AACAAAAGAC CAGAGAGAAA GTGCAAAGAT TGGCTGTAGA TCACAAGATG CAAAAGGAAA AGCTTCATAA GAGAATTGCT GCACTAGAAA GGCAGCTTGA TCAGAAGCAG GAGCTTGAAC TGGAGGTCGA GCAACTGAAA AGACAGCTGA GCGTGATGAG ACACGTGGAA TTGGACAGTG GTTCTGAAAT TGTGAACAAG GTGGAGACCT TCCTCAGAGA CCTTAGTGAG ACGGAAGGAG AGCTTGCACA CTTAAATAAA TTTAATCAAG ATCTTGTTGT TCAAGAGCGG AAGAGCAATG ATGAGCTTCA AGAAGCTCGA AGAGCATTGA TAAGTAATTT GAGGGACATG AGATCGCATA TTGGTGTTAG GAGAATGGGG GAGCTTGACA CCAAACCGTT TATGGAAGCA ATGAGAAAAA AGTACTGTCA AGAAGATTTA GAGGATTGGG CAGTTGAAGT TATCCAGCTC TGGGAGGAAT ATCTTAAGGA CCCAGATTGG CATCCTTTTA AACGGATAAA GCTTGAGACT GCAGAAACAG TAGTGGAAGT AATAGATGAG GATGACGAGA AGTTAAGAAC CCTGAAGAAT GAACTGGGGG ATGATGCGTA CCAAGCAGTG GCAAATGCAT TGCTGGAAAT AAACGAATAT AATCCAAGTG GAAGGTACAT CTCCTCAGAG CTATGGAACT TTAGAGAAGA CAGGAAGGCT ACGCTTGAGG AAGGTGTTAC TTGTCTACTG GAGCAATGGA ATCAGGCGAA GCATCACAAG CCTTAA 
Length1956
Protein Sequence
Protein Residue
Map Locationscaffold_3: 4744543.. 4747323
Download Sequence
A.thaliana
AGI-codeAT3G12550.1
DescriptionXH/XS domain-containing protein
TAIR curator summary
Alias[FDM3][factor of DNA methylation 3]
Gene coexpression
MR
MR Locus Description
12.5698 Ahg487800 ARABIDOPSIS TRITHORAX-RELATED PROTEIN 5
15.5885 Ahg483745
18.735 Ahg494045 Saccharopine dehydrogenase
24.6982 Ahg920881
25.865 Ahg493915 PQ-loop repeat family protein / transmembrane family protein
25.923 Ahg485412 GRAS family transcription factor
32.6803 Ahg931495 Major facilitator superfamily protein
36.1801 Ahg486115 Protein kinase superfamily protein
37.9473 Ahg497111 Gamma interferon responsive lysosomal thiol (GILT) reductase family protein
48.5386 Ahg480346 CBS domain-containing protein with a domain of unknown function (DUF21)
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression